FFCP PHASE1:Hg19::chr17:46970128..46970132,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=516 | |EntrezGene=516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=841 | |HGNC=841 | ||
|TSSclassifier=strong | |||
|UniProt=D6RCS8 | |UniProt=D6RCS8 | ||
|association_with_transcript=0bp_to_ENST00000513347,ENST00000514759_5end | |association_with_transcript=0bp_to_ENST00000513347,ENST00000514759_5end | ||
|cluster_id=chr17:46970128..46970132,+ | |||
|description=CAGE_peak_3_at_ATP5G1_5end | |description=CAGE_peak_3_at_ATP5G1_5end | ||
|id=chr17:46970128..46970132,+ | |id=chr17:46970128..46970132,+ | ||
|ontology_enrichment_celltype=CL:0000183!1.71e-07!59;CL:0000187!2.83e-07!54;CL:0000680!3.89e-07!57;CL:0000056!3.89e-07!57;CL:0000355!3.89e-07!57 | |ontology_enrichment_celltype=CL:0000183!1.71e-07!59;CL:0000187!2.83e-07!54;CL:0000680!3.89e-07!57;CL:0000056!3.89e-07!57;CL:0000355!3.89e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,4.68e-08,55;CL:0000680,5.42e-08,58;CL:0000056,5.42e-08,58;CL:0000355,5.42e-08,58;CL:0000192,8.24e-07,43;CL:0000514,8.24e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!7.14e-14!239;DOID:162!4.17e-13!235;DOID:0050687!2.74e-10!143;DOID:305!2.95e-08!106 | |ontology_enrichment_disease=DOID:14566!7.14e-14!239;DOID:162!4.17e-13!235;DOID:0050687!2.74e-10!143;DOID:305!2.95e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!7.73e-10!238;UBERON:0009142!7.73e-10!238;UBERON:0002100!1.35e-08!216;UBERON:0000481!9.11e-08!347;UBERON:0000486!1.48e-07!82;UBERON:0000914!1.88e-07!83;UBERON:0002329!1.88e-07!83;UBERON:0003077!1.88e-07!83;UBERON:0003059!1.88e-07!83;UBERON:0007282!1.88e-07!83;UBERON:0009618!1.88e-07!83;UBERON:0007285!1.88e-07!83;UBERON:0004290!1.91e-07!70;UBERON:0001134!2.21e-07!61;UBERON:0002036!2.21e-07!61;UBERON:0003082!2.21e-07!61;UBERON:0002385!2.85e-07!63;UBERON:0001015!2.85e-07!63;UBERON:0000383!2.85e-07!63 | |ontology_enrichment_uberon=UBERON:0003104!7.73e-10!238;UBERON:0009142!7.73e-10!238;UBERON:0002100!1.35e-08!216;UBERON:0000481!9.11e-08!347;UBERON:0000486!1.48e-07!82;UBERON:0000914!1.88e-07!83;UBERON:0002329!1.88e-07!83;UBERON:0003077!1.88e-07!83;UBERON:0003059!1.88e-07!83;UBERON:0007282!1.88e-07!83;UBERON:0009618!1.88e-07!83;UBERON:0007285!1.88e-07!83;UBERON:0004290!1.91e-07!70;UBERON:0001134!2.21e-07!61;UBERON:0002036!2.21e-07!61;UBERON:0003082!2.21e-07!61;UBERON:0002385!2.85e-07!63;UBERON:0001015!2.85e-07!63;UBERON:0000383!2.85e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.72e-09;9!UBERON:0001557;7.72e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.57e-10,199;UBERON:0001737,9.53e-10,9;UBERON:0003104,1.01e-08,160;UBERON:0009142,1.01e-08,160;UBERON:0002329,1.96e-08,71;UBERON:0003059,1.96e-08,71;UBERON:0007282,1.96e-08,71;UBERON:0004290,1.96e-08,71;UBERON:0009618,1.96e-08,71;UBERON:0007503,2.73e-08,78;UBERON:0003077,3.29e-08,72;UBERON:0007285,3.29e-08,72;UBERON:0007524,5.42e-08,73;UBERON:0001134,5.91e-08,62;UBERON:0002036,5.91e-08,62;UBERON:0003082,5.91e-08,62;UBERON:0005256,7.98e-08,122;UBERON:0002385,1.71e-07,64;UBERON:0001015,1.71e-07,64;UBERON:0000383,1.71e-07,64;UBERON:0000486,8.13e-07,83 | |||
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| ||
|short_description=p3@ATP5G1 | |short_description=p3@ATP5G1 | ||
}} | }} |
Latest revision as of 18:37, 15 September 2015
Short description: | p3@ATP5G1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP5G1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000513347, ENST00000514759_5end |
EntrezGene: | ATP5G1 |
HGNC: | 841 |
UniProt: | D6RCS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 4.68e-08 | 55 |
muscle precursor cell | 5.42e-08 | 58 |
myoblast | 5.42e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.42e-08 | 58 |
smooth muscle cell | 8.24e-07 | 43 |
smooth muscle myoblast | 8.24e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.57e-10 | 199 |
larynx | 9.53e-10 | 9 |
mesenchyme | 1.01e-08 | 160 |
entire embryonic mesenchyme | 1.01e-08 | 160 |
somite | 1.96e-08 | 71 |
presomitic mesoderm | 1.96e-08 | 71 |
presumptive segmental plate | 1.96e-08 | 71 |
dermomyotome | 1.96e-08 | 71 |
trunk paraxial mesoderm | 1.96e-08 | 71 |
epithelial vesicle | 2.73e-08 | 78 |
paraxial mesoderm | 3.29e-08 | 72 |
presumptive paraxial mesoderm | 3.29e-08 | 72 |
dense mesenchyme tissue | 5.42e-08 | 73 |
skeletal muscle tissue | 5.91e-08 | 62 |
striated muscle tissue | 5.91e-08 | 62 |
myotome | 5.91e-08 | 62 |
trunk mesenchyme | 7.98e-08 | 122 |
muscle tissue | 1.71e-07 | 64 |
musculature | 1.71e-07 | 64 |
musculature of body | 1.71e-07 | 64 |
multilaminar epithelium | 8.13e-07 | 83 |