FFCP PHASE2:Hg19::chr8:119964281..119964288,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4982 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11909 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11909 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O00300 | ||
|association_with_transcript=94bp_to_NM_002546,uc003yon.3,uc010mdc.1_5end | |association_with_transcript=94bp_to_NM_002546,uc003yon.3,uc010mdc.1_5end | ||
|cluster_id=chr8:119964281..119964288,- | |cluster_id=chr8:119964281..119964288,- | ||
Latest revision as of 21:01, 15 September 2015
| Short description: | p5@TNFRSF11B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_TNFRSF11B_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 94bp_to_NM_002546, uc003yon.3, uc010mdc.1_5end |
| EntrezGene: | TNFRSF11B |
| HGNC: | 11909 |
| UniProt: | O00300 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@TNFRSF11B |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 3.02e-12 | 76 |
| fibroblast of periodontium | 3.10e-11 | 6 |
| hair follicle dermal papilla cell | 3.55e-09 | 3 |
| stem cell of epidermis | 3.55e-09 | 3 |
| fibroblast of gingiva | 5.37e-09 | 5 |
| prostate stromal cell | 7.54e-09 | 3 |
| receptor cell | 4.52e-07 | 6 |
| sensory epithelial cell | 4.52e-07 | 6 |
| olfactory epithelial cell | 4.52e-07 | 6 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| periodontium | 3.10e-11 | 6 |
| dentition | 3.10e-11 | 6 |
| skull | 1.44e-09 | 7 |
| surface structure | 1.94e-09 | 99 |
| dermal papilla | 3.55e-09 | 3 |
| papillary layer of dermis | 3.55e-09 | 3 |
Showing 1 to 6 of 6 entries
