FFCP PHASE1:Hg19::chr22:51020890..51020901,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1120 | |EntrezGene=1120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1938 | |HGNC=1938 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000468532_5end | |association_with_transcript=-3bp_to_ENST00000468532_5end | ||
|cluster_id=chr22:51020890..51020901,- | |||
|description=CAGE_peak_6_at_CHKB_5end | |description=CAGE_peak_6_at_CHKB_5end | ||
|id=chr22:51020890..51020901,- | |id=chr22:51020890..51020901,- | ||
|ontology_enrichment_celltype=CL:0000738!3.11e-11!140;CL:0002087!2.55e-10!119;CL:0002031!8.07e-10!124;CL:0000037!7.26e-09!172;CL:0000566!7.26e-09!172;CL:0002032!2.07e-08!165;CL:0000837!2.07e-08!165;CL:0002057!3.51e-08!42;CL:0000988!6.01e-08!182;CL:0000557!6.88e-08!71;CL:0000860!7.11e-08!45;CL:0002009!7.07e-07!65;CL:0002194!7.93e-07!63;CL:0000576!7.93e-07!63;CL:0000040!7.93e-07!63;CL:0000559!7.93e-07!63;CL:0000839!8.30e-07!70 | |ontology_enrichment_celltype=CL:0000738!3.11e-11!140;CL:0002087!2.55e-10!119;CL:0002031!8.07e-10!124;CL:0000037!7.26e-09!172;CL:0000566!7.26e-09!172;CL:0002032!2.07e-08!165;CL:0000837!2.07e-08!165;CL:0002057!3.51e-08!42;CL:0000988!6.01e-08!182;CL:0000557!6.88e-08!71;CL:0000860!7.11e-08!45;CL:0002009!7.07e-07!65;CL:0002194!7.93e-07!63;CL:0000576!7.93e-07!63;CL:0000040!7.93e-07!63;CL:0000559!7.93e-07!63;CL:0000839!8.30e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0002032;1.05e-08;1!CL:0002127;1.05e-08;1!CL:0000911;1.05e-08;1!CL:0000557;1.05e-08;1!CL:0000814;1.05e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,7.75e-09,1;CL:0000914,7.75e-09,1;CL:0000911,7.75e-09,1;CL:0000814,7.75e-09,1;CL:0002042,7.75e-09,1;CL:0002039,7.75e-09,1;CL:0002040,7.75e-09,1;CL:0002041,7.75e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.72e-07;10!UBERON:0005564;2.72e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;3.71e-09;1!DOID:0070004;3.71e-09;1!DOID:1799;1.05e-08;1!DOID:10165;1.05e-08;1!DOID:1798;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,3.87e-09,1;DOID:0070004,3.87e-09,1;DOID:1799,1.05e-08,1;DOID:10165,1.05e-08,1;DOID:1798,1.05e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.23e-08!34;UBERON:0003528!1.23e-08!34;UBERON:0001893!2.82e-08!34;UBERON:0001017!4.63e-08!82;UBERON:0002616!4.81e-08!59;UBERON:0001049!5.55e-08!57;UBERON:0005068!5.55e-08!57;UBERON:0006241!5.55e-08!57;UBERON:0007135!5.55e-08!57;UBERON:0001869!5.79e-08!32;UBERON:0002791!7.89e-08!33;UBERON:0000073!1.19e-07!94;UBERON:0001016!1.19e-07!94;UBERON:0002780!1.29e-07!41;UBERON:0001890!1.29e-07!41;UBERON:0006240!1.29e-07!41;UBERON:0000955!1.69e-07!69;UBERON:0006238!1.69e-07!69;UBERON:0005743!1.91e-07!86;UBERON:0002371!2.91e-07!80;UBERON:0003080!3.26e-07!42;UBERON:0001474!6.33e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.30e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.77e-09,8;UBERON:0003135,8.97e-07,11 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0.383829398097213,0.619264493264304,0,0,0,0.232401601740905,0,0,0.553995408531877,0.802177789880567,0.651032612147555,0.447830948479849,0.32389366601898,0.515151135268373,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,0.449446968890169,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0,1.24564449799115,0.75374599577023,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.422510572623884,0.425208599930087,0.419317291016752,0.22465726229299,0.901061357049038,0.64290234678832,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,1.76171156811282,0,0,1.12101712596307,0.263384084775077,0.786839080455332,0.786021525498329,0.616804496998528,0.167186495390678,0,0,0,0.334231370655521,0.883817722424512,1.10766947291811,0.270803863765016,0.512365278902701,0.910415432919148,0.328875809207352,0,0.289803085735052,0,0.535081656179426,2.09071047609954,0.339928028092699,0,0,0.253019692019503,0.95569624297229,0,0,0.451725357233318,0.383959833463255,2.49861453104692,0.236777252044017,0.821127996921047,1.00803371612366,0.802320587350522,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0.087834785693126,0.982343066232845,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.37223371266318,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0.243947412259191,0.662648841607426,0.580969714347592,0.310983165046111,0.504641701751257,1.45990943630332,0,0,0,0,0,0,0,0.241011029883482,0,0,0.71181185733329,0.134831308160164,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,1.05658120815871,0.414656231081544,0,0.50496973370552,0.126995788584338,0,0,0,0.308482478109971,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,1.45710687191585,0.197030760201927,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,2.0694614258501,0,0.184369168541703,0,0.195801157462741,0,0.206768026122887,0.647142602455851,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.534120355637366,0,0,0,0,0.0711418433484141,0,0.399158742865633,0,0,0,0.280797178113459,0.684704037099577,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0.121360521749513,1.11443384277478,0,0.23874448473769,0,0,0.994147647766298,0.844016498463076,0.222617410045812,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0.511572370226872,0,0,0,0,0.556608588971108,0,0,0,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0.583209226766509,0,0.885741385813839,0.482385754501632,0,0.331737779793674,0.295547618953547,0.87754158861589,0.32681539055697,0,0,0,0,0.269272933229316,2.28159481036217,0,0.0915975934018623,0,0,0.156980256395025,0.332423363800313,0,0,0.167821586975843,0,0,0.210998064528027,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0.274083849293502,0,0.50648636764703,0.391102765469606,0,0,0,0,0.114536596165916,0,0.576219191952599,0,0.235694034616795,0,0.104602846312333,0,0.866851769704557,0.600420288709789,0.136905378891993,1.27746588066972,0,0.525774708558629,0,0,0,0,0.429226048136571,0,0.067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| ||
|short_description=p6@CHKB | |short_description=p6@CHKB | ||
}} | }} |
Latest revision as of 21:40, 15 September 2015
Short description: | p6@CHKB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CHKB_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000468532_5end |
EntrezGene: | CHKB |
HGNC: | 1938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 7.75e-09 | 1 |
immature NK T cell | 7.75e-09 | 1 |
effector T cell | 7.75e-09 | 1 |
mature NK T cell | 7.75e-09 | 1 |
immature NK T cell stage IV | 7.75e-09 | 1 |
immature NK T cell stage I | 7.75e-09 | 1 |
immature NK T cell stage II | 7.75e-09 | 1 |
immature NK T cell stage III | 7.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 3.77e-09 | 8 |
male reproductive organ | 8.97e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.87e-09 | 1 |
myeloma | 3.87e-09 | 1 |
islet cell tumor | 1.05e-08 | 1 |
endocrine pancreas cancer | 1.05e-08 | 1 |
pancreatic endocrine carcinoma | 1.05e-08 | 1 |