FFCP PHASE1:Hg19::chr1:223889310..223889319,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=824 | |EntrezGene=824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1479 | |HGNC=1479 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZA96,B4DN77,P17655,Q59EF6 | |UniProt=B7ZA96,B4DN77,P17655,Q59EF6 | ||
|association_with_transcript=15bp_to_ENST00000433674,NM_001146068,uc010puy.1_5end | |association_with_transcript=15bp_to_ENST00000433674,NM_001146068,uc010puy.1_5end | ||
|cluster_id=chr1:223889310..223889319,+ | |||
|description=CAGE_peak_10_at_CAPN2_5end | |description=CAGE_peak_10_at_CAPN2_5end | ||
|id=chr1:223889310..223889319,+ | |id=chr1:223889310..223889319,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.58e-26!180;CL:0000057!2.90e-18!75;CL:0002620!2.05e-14!23;CL:0000048!6.33e-11!430;CL:0000680!2.96e-10!57;CL:0000056!2.96e-10!57;CL:0000355!2.96e-10!57;CL:0000723!2.96e-10!436;CL:0000034!1.05e-09!444;CL:0000144!1.45e-09!625;CL:0002334!3.52e-09!12;CL:0000548!4.72e-09!679;CL:0000004!4.72e-09!679;CL:0000255!4.72e-09!679;CL:0000012!9.06e-09!682;CL:0000187!1.00e-08!54;CL:0002371!2.36e-08!591;CL:0000359!7.89e-08!32;CL:0000393!1.59e-07!60;CL:0000211!1.59e-07!60;CL:0000192!2.34e-07!42;CL:0000514!2.34e-07!42;CL:0000183!3.04e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.58e-26!180;CL:0000057!2.90e-18!75;CL:0002620!2.05e-14!23;CL:0000048!6.33e-11!430;CL:0000680!2.96e-10!57;CL:0000056!2.96e-10!57;CL:0000355!2.96e-10!57;CL:0000723!2.96e-10!436;CL:0000034!1.05e-09!444;CL:0000144!1.45e-09!625;CL:0002334!3.52e-09!12;CL:0000548!4.72e-09!679;CL:0000004!4.72e-09!679;CL:0000255!4.72e-09!679;CL:0000012!9.06e-09!682;CL:0000187!1.00e-08!54;CL:0002371!2.36e-08!591;CL:0000359!7.89e-08!32;CL:0000393!1.59e-07!60;CL:0000211!1.59e-07!60;CL:0000192!2.34e-07!42;CL:0000514!2.34e-07!42;CL:0000183!3.04e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.30e-10;23!CL:0002334;9.18e-09;12!CL:0002615;1.78e-08;3!CL:0000197;7.14e-08;6!CL:0000098;7.14e-08;6!CL:0002167;7.14e-08;6!CL:0000359;8.94e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.09e-13,76;CL:0002620,1.32e-10,23;CL:0002334,4.41e-09,12;CL:0002615,1.23e-08,3;CL:0000359,2.29e-08,32;CL:0000048,3.42e-08,427;CL:0000197,6.35e-08,6;CL:0000098,6.35e-08,6;CL:0002167,6.35e-08,6;CL:0000723,7.04e-08,433;CL:0000034,1.78e-07,441;CL:0000136,2.50e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.46e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:17;4.04e-12;5!DOID:450;4.04e-12;5!DOID:66;4.04e-12;5!DOID:423;4.04e-12;5!DOID:0080000;4.04e-12;5!DOID:11722;4.04e-12;5!DOID:0060084;1.78e-08;3!DOID:127;1.78e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.51e-12,5;DOID:450,2.51e-12,5;DOID:66,2.51e-12,5;DOID:423,2.51e-12,5;DOID:0080000,2.51e-12,5;DOID:11722,2.51e-12,5;DOID:0060084,1.81e-08,3;DOID:127,1.81e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.62e-14!83;UBERON:0002329!2.62e-14!83;UBERON:0003077!2.62e-14!83;UBERON:0003059!2.62e-14!83;UBERON:0007282!2.62e-14!83;UBERON:0009618!2.62e-14!83;UBERON:0007285!2.62e-14!83;UBERON:0004290!1.79e-11!70;UBERON:0002199!4.72e-10!45;UBERON:0002416!4.72e-10!45;UBERON:0000486!8.67e-10!82;UBERON:0002097!3.11e-09!40;UBERON:0005256!5.18e-09!143;UBERON:0001134!6.41e-09!61;UBERON:0002036!6.41e-09!61;UBERON:0003082!6.41e-09!61;UBERON:0002385!2.51e-08!63;UBERON:0001015!2.51e-08!63;UBERON:0000383!2.51e-08!63;UBERON:0002100!3.79e-08!216;UBERON:0003102!1.88e-07!95;UBERON:0003688!6.27e-07!6;UBERON:0002358!6.27e-07!6;UBERON:0003684!6.27e-07!6;UBERON:0001178!6.27e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.39e-10;6!UBERON:0002358;2.39e-10;6!UBERON:0003684;2.39e-10;6!UBERON:0001178;2.39e-10;6!UBERON:0002097;2.50e-07;41!UBERON:0004457;9.20e-07;9!UBERON:0000042;9.20e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.24e-10,6;UBERON:0002358,2.24e-10,6;UBERON:0003684,2.24e-10,6;UBERON:0001178,2.24e-10,6;UBERON:0002097,1.26e-08,41;UBERON:0002199,1.55e-08,46;UBERON:0002416,1.55e-08,46;UBERON:0001637,5.55e-08,42;UBERON:0003509,5.55e-08,42;UBERON:0004572,5.55e-08,42 | |||
|phase1_expression=0.363356758541113,1.2846031433459,2.67813367782345,2.00146596706261,1.78784437770915,4.36169262050184,0,1.26343974685366,0,0,0,0,0,0.247532705920093,0.662794751455832,2.6893005858071,0.602694528023977,2.19093027116212,1.95173119516203,0.123121058076788,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,1.05927344650575,1.14734648299525,0,0.560677600142307,0,0,0.622422070799533,0,0,0,0,0,2.49728061464256,0,0.597794722207204,0.117434498643765,0.161872944368132,0.140450806702248,0.816616685019573,0,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,1.31693286264251,1.22595118319608,0.600952235626387,0,1.79389635688862,2.13557388818567,1.27159140695737,1.50045548042201,1.13357782162283,0.515281080091258,1.48893485065272,1.0126579934476,0.487185025805993,0.757301322732344,1.93304787148829,0.80823028409406,0.355009592516614,1.0075209822764,2.03472710772585,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,2.76269842704961,0.928735856063958,2.88751792667834,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.5867062865676,0.904902010304444,0,0,5.05282421511254,3.12022310734098,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,2.41151501647669,0,2.49932477955143,0,0,0,4.31324739884849,1.14861935834114,1.42636905040718,0.579125226670317,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,2.9115920614313,4.99601168632053,5.51958452618771,5.03708084468667,1.20378439891088,0,0,1.32845119707087,1.10621501125022,0.434418072340414,0,0,0,0,0,0.303127571446259,0,0.30239029332968,1.73675465473144,0.460385919864187,1.68396056659844,0.640695746278505,1.02341449813341,1.44768529029247,1.48418066444991,0.616838775210622,0.532685175939381,1.14978018419333,0,1.97557643381931,0,0.200506470303285,0,0.229628896329213,1.82091168006717,0.655622074797121,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,3.21367859688319,0.290012154876366,0.154048617114644,0,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,1.39453664789186,0,0,0,0,0,1.29726953372744,0.429374660225974,0,0,0.953150969619124,0,0,0.636406495851874,0,0.359744915166629,0,0,1.2130948894399,0,1.68503382495592,0,0.487426979262569,1.05650146756755,0.545999645631943,0,0,1.10273068709225,0,0,0,0.655894752046633,1.62328301570163,1.239293992399,0.281695602532241,0.286822704408103,0.196498082026242,1.426684205925,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0.307160702099232,0,0,0,0,0,0.597743964753209,0,0,1.32949287252801,0,0.933118762985422,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.34823682632161,0.17472666824203,0.343972064943233,0,0,0,0,0,0,0.137041924646751,0,0,0,0.320635281006135,0,0,0,0,0,0,0.248505071130865,0,0,0.209205692624666,0.101998217636322,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0.25426853765475,2.17199840701485,2.5926644736038,1.30634944043764,0,0,1.02232813071253,0.226624183040251,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,1.10961172300523,0.947015026375446,1.0062716070103,0.889811221596536,0.228840068396924,0.302461847526478,0.466311601748341,0.443565449968902,0.63718706865481,0,0.776314784381297,5.80588690977198,2.92425886013794,0.521745061811734,0.901545653983311,3.04644169735036,2.84809513243263,2.18218391043071,0.751873899297419,0.464033759878494,0.398095888698616,0.800055529326307,1.03018711554838,0.336749488765919,1.26184898228651,0,0,0,0.453411851024545,3.47283711485751,0.244736704506468,3.40268798054826,0.308801447160972,0,1.06013487567529,0.771656153083659,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0.918736432059601,0,0,0,0,0,0,0,0,0.687034029507179,0,0,0,0.381382095467167,0,0.198916222116275,0,0.605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|phase1_expression=0.363356758541113,1.2846031433459,2.67813367782345,2.00146596706261,1.78784437770915,4.36169262050184,0,1.26343974685366,0,0,0,0,0,0.247532705920093,0.662794751455832,2.6893005858071,0.602694528023977,2.19093027116212,1.95173119516203,0.123121058076788,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,1.05927344650575,1.14734648299525,0,0.560677600142307,0,0,0.622422070799533,0,0,0,0,0,2.49728061464256,0,0.597794722207204,0.117434498643765,0.161872944368132,0.140450806702248,0.816616685019573,0,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,1.31693286264251,1.22595118319608,0.600952235626387,0,1.79389635688862,2.13557388818567,1.27159140695737,1.50045548042201,1.13357782162283,0.515281080091258,1.48893485065272,1.0126579934476,0.487185025805993,0.757301322732344,1.93304787148829,0.80823028409406,0.355009592516614,1.0075209822764,2.03472710772585,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,2.76269842704961,0.928735856063958,2.88751792667834,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.5867062865676,0.904902010304444,0,0,5.05282421511254,3.12022310734098,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,2.41151501647669,0,2.49932477955143,0,0,0,4.31324739884849,1.14861935834114,1.42636905040718,0.579125226670317,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,2.9115920614313,4.99601168632053,5.51958452618771,5.03708084468667,1.20378439891088,0,0,1.32845119707087,1.10621501125022,0.434418072340414,0,0,0,0,0,0.303127571446259,0,0.30239029332968,1.73675465473144,0.460385919864187,1.68396056659844,0.640695746278505,1.02341449813341,1.44768529029247,1.48418066444991,0.616838775210622,0.532685175939381,1.14978018419333,0,1.97557643381931,0,0.200506470303285,0,0.229628896329213,1.82091168006717,0.655622074797121,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,3.21367859688319,0.290012154876366,0.154048617114644,0,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,1.39453664789186,0,0,0,0,0,1.29726953372744,0.429374660225974,0,0,0.953150969619124,0,0,0.636406495851874,0,0.359744915166629,0,0,1.2130948894399,0,1.68503382495592,0,0.487426979262569,1.05650146756755,0.545999645631943,0,0,1.10273068709225,0,0,0,0.655894752046633,1.62328301570163,1.239293992399,0.281695602532241,0.286822704408103,0.196498082026242,1.426684205925,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0.307160702099232,0,0,0,0,0,0.597743964753209,0,0,1.32949287252801,0,0.933118762985422,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.34823682632161,0.17472666824203,0.343972064943233,0,0,0,0,0,0,0.137041924646751,0,0,0,0.320635281006135,0,0,0,0,0,0,0.248505071130865,0,0,0.209205692624666,0.101998217636322,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0.25426853765475,2.17199840701485,2.5926644736038,1.30634944043764,0,0,1.02232813071253,0.226624183040251,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,1.10961172300523,0.947015026375446,1.0062716070103,0.889811221596536,0.228840068396924,0.302461847526478,0.466311601748341,0.443565449968902,0.63718706865481,0,0.776314784381297,5.80588690977198,2.92425886013794,0.521745061811734,0.901545653983311,3.04644169735036,2.84809513243263,2.18218391043071,0.751873899297419,0.464033759878494,0.398095888698616,0.800055529326307,1.03018711554838,0.336749488765919,1.26184898228651,0,0,0,0.453411851024545,3.47283711485751,0.244736704506468,3.40268798054826,0.308801447160972,0,1.06013487567529,0.771656153083659,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0.918736432059601,0,0,0,0,0,0,0,0,0.687034029507179,0,0,0,0.381382095467167,0,0.198916222116275,0,0.605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| ||
|short_description=p10@CAPN2 | |short_description=p10@CAPN2 | ||
}} | }} |
Latest revision as of 22:10, 15 September 2015
Short description: | p10@CAPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CAPN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000433674, NM_001146068, uc010puy.1_5end |
EntrezGene: | CAPN2 |
HGNC: | 1479 |
UniProt: | B7ZA96B4DN77P17655Q59EF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.09e-13 | 76 |
skin fibroblast | 1.32e-10 | 23 |
preadipocyte | 4.41e-09 | 12 |
adipocyte of omentum tissue | 1.23e-08 | 3 |
vascular associated smooth muscle cell | 2.29e-08 | 32 |
multi fate stem cell | 3.42e-08 | 427 |
receptor cell | 6.35e-08 | 6 |
sensory epithelial cell | 6.35e-08 | 6 |
olfactory epithelial cell | 6.35e-08 | 6 |
somatic stem cell | 7.04e-08 | 433 |
stem cell | 1.78e-07 | 441 |
fat cell | 2.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.24e-10 | 6 |
peritoneum | 2.24e-10 | 6 |
abdominal cavity | 2.24e-10 | 6 |
visceral peritoneum | 2.24e-10 | 6 |
skin of body | 1.26e-08 | 41 |
integument | 1.55e-08 | 46 |
integumental system | 1.55e-08 | 46 |
artery | 5.55e-08 | 42 |
arterial blood vessel | 5.55e-08 | 42 |
arterial system | 5.55e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.51e-12 | 5 |
myotonic disease | 2.51e-12 | 5 |
muscle tissue disease | 2.51e-12 | 5 |
myopathy | 2.51e-12 | 5 |
muscular disease | 2.51e-12 | 5 |
myotonic dystrophy | 2.51e-12 | 5 |
cell type benign neoplasm | 1.81e-08 | 3 |
leiomyoma | 1.81e-08 | 3 |