FFCP PHASE1:Hg19::chr12:104443781..104443859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83468 | |EntrezGene=83468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24890 | |HGNC=24890 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000550816_5end | |association_with_transcript=0bp_to_ENST00000550816_5end | ||
|cluster_id=chr12:104443781..104443859,- | |||
|description=CAGE_peak_2_at_GLT8D2_5end | |description=CAGE_peak_2_at_GLT8D2_5end | ||
|id=chr12:104443781..104443859,- | |id=chr12:104443781..104443859,- | ||
|ontology_enrichment_celltype=CL:0000055!3.93e-37!180;CL:0000057!4.34e-22!75;CL:0000680!2.18e-17!57;CL:0000056!2.18e-17!57;CL:0000355!2.18e-17!57;CL:0000187!7.16e-17!54;CL:0000183!1.56e-15!59;CL:0000393!3.17e-15!60;CL:0000211!3.17e-15!60;CL:0000192!2.03e-12!42;CL:0000514!2.03e-12!42;CL:0002620!1.16e-10!23;CL:0000359!3.66e-09!32 | |ontology_enrichment_celltype=CL:0000055!3.93e-37!180;CL:0000057!4.34e-22!75;CL:0000680!2.18e-17!57;CL:0000056!2.18e-17!57;CL:0000355!2.18e-17!57;CL:0000187!7.16e-17!54;CL:0000183!1.56e-15!59;CL:0000393!3.17e-15!60;CL:0000211!3.17e-15!60;CL:0000192!2.03e-12!42;CL:0000514!2.03e-12!42;CL:0002620!1.16e-10!23;CL:0000359!3.66e-09!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.79e-12;23!CL:0000187;1.55e-10;55!CL:0000192;6.72e-10;43!CL:0000393;8.30e-10;61!CL:0000211;8.30e-10;61!CL:0000057;1.20e-09;73!CL:0000359;2.10e-09;32!CL:0000134;1.16e-07;55!CL:0002320;1.56e-07;188!CL:0000723;3.71e-07;61!CL:0000499;6.39e-07;28!CL:0000048;6.89e-07;58 | |ontology_enrichment_celltype_v019=CL:0002620;5.79e-12;23!CL:0000187;1.55e-10;55!CL:0000192;6.72e-10;43!CL:0000393;8.30e-10;61!CL:0000211;8.30e-10;61!CL:0000057;1.20e-09;73!CL:0000359;2.10e-09;32!CL:0000134;1.16e-07;55!CL:0002320;1.56e-07;188!CL:0000723;3.71e-07;61!CL:0000499;6.39e-07;28!CL:0000048;6.89e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.30e-25,76;CL:0000680,3.69e-19,58;CL:0000056,3.69e-19,58;CL:0000355,3.69e-19,58;CL:0000187,1.48e-18,55;CL:0000393,3.55e-17,61;CL:0000211,3.55e-17,61;CL:0000192,1.83e-13,43;CL:0000514,1.83e-13,43;CL:0002620,4.74e-12,23;CL:0000359,6.59e-10,32;CL:0000048,9.97e-09,427;CL:0000723,3.81e-08,433;CL:0000034,3.67e-07,441;CL:0000499,6.59e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;3.25e-10;58!CL:0000514;6.72e-10;43 | |ontology_enrichment_development_v019=CL:0000355;3.25e-10;58!CL:0000514;6.72e-10;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.52e-25!83;UBERON:0002329!3.52e-25!83;UBERON:0003077!3.52e-25!83;UBERON:0003059!3.52e-25!83;UBERON:0007282!3.52e-25!83;UBERON:0009618!3.52e-25!83;UBERON:0007285!3.52e-25!83;UBERON:0004290!6.62e-20!70;UBERON:0000486!4.69e-19!82;UBERON:0002385!1.54e-17!63;UBERON:0001015!1.54e-17!63;UBERON:0000383!1.54e-17!63;UBERON:0001134!2.10e-17!61;UBERON:0002036!2.10e-17!61;UBERON:0003082!2.10e-17!61;UBERON:0003102!8.56e-14!95;UBERON:0005256!1.28e-12!143;UBERON:0000481!4.58e-10!347;UBERON:0000475!1.84e-09!365;UBERON:0002199!3.08e-09!45;UBERON:0002416!3.08e-09!45;UBERON:0003104!4.66e-09!238;UBERON:0009142!4.66e-09!238;UBERON:0000468!5.58e-09!659;UBERON:0002097!3.18e-08!40;UBERON:0002100!8.18e-08!216;UBERON:0000948!8.14e-07!24;UBERON:0005498!8.14e-07!24;UBERON:0004140!8.14e-07!24;UBERON:0009881!8.14e-07!24;UBERON:0004141!8.14e-07!24;UBERON:0003084!8.14e-07!24;UBERON:0007005!8.14e-07!24;UBERON:0004139!8.14e-07!24;UBERON:0004291!8.14e-07!24;UBERON:0007100!9.66e-07!27 | |ontology_enrichment_uberon=UBERON:0000914!3.52e-25!83;UBERON:0002329!3.52e-25!83;UBERON:0003077!3.52e-25!83;UBERON:0003059!3.52e-25!83;UBERON:0007282!3.52e-25!83;UBERON:0009618!3.52e-25!83;UBERON:0007285!3.52e-25!83;UBERON:0004290!6.62e-20!70;UBERON:0000486!4.69e-19!82;UBERON:0002385!1.54e-17!63;UBERON:0001015!1.54e-17!63;UBERON:0000383!1.54e-17!63;UBERON:0001134!2.10e-17!61;UBERON:0002036!2.10e-17!61;UBERON:0003082!2.10e-17!61;UBERON:0003102!8.56e-14!95;UBERON:0005256!1.28e-12!143;UBERON:0000481!4.58e-10!347;UBERON:0000475!1.84e-09!365;UBERON:0002199!3.08e-09!45;UBERON:0002416!3.08e-09!45;UBERON:0003104!4.66e-09!238;UBERON:0009142!4.66e-09!238;UBERON:0000468!5.58e-09!659;UBERON:0002097!3.18e-08!40;UBERON:0002100!8.18e-08!216;UBERON:0000948!8.14e-07!24;UBERON:0005498!8.14e-07!24;UBERON:0004140!8.14e-07!24;UBERON:0009881!8.14e-07!24;UBERON:0004141!8.14e-07!24;UBERON:0003084!8.14e-07!24;UBERON:0007005!8.14e-07!24;UBERON:0004139!8.14e-07!24;UBERON:0004291!8.14e-07!24;UBERON:0007100!9.66e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.96e-10;31!UBERON:0001015;4.96e-10;31!UBERON:0000383;4.96e-10;31!UBERON:0000075;1.78e-08;16!UBERON:0002384;4.32e-08;198!UBERON:0002204;6.67e-08;70!UBERON:0002097;4.39e-07;41!UBERON:0004905;9.43e-07;8!UBERON:0000982;9.43e-07;8!UBERON:0004770;9.43e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0002385;4.96e-10;31!UBERON:0001015;4.96e-10;31!UBERON:0000383;4.96e-10;31!UBERON:0000075;1.78e-08;16!UBERON:0002384;4.32e-08;198!UBERON:0002204;6.67e-08;70!UBERON:0002097;4.39e-07;41!UBERON:0004905;9.43e-07;8!UBERON:0000982;9.43e-07;8!UBERON:0004770;9.43e-07;8 | ||
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| ||
|short_description=p2@GLT8D2 | |short_description=p2@GLT8D2 | ||
}} | }} |
Latest revision as of 23:26, 15 September 2015
Short description: | p2@GLT8D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GLT8D2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000550816_5end |
EntrezGene: | GLT8D2 |
HGNC: | 24890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.30e-25 | 76 |
muscle precursor cell | 3.69e-19 | 58 |
myoblast | 3.69e-19 | 58 |
multi-potent skeletal muscle stem cell | 3.69e-19 | 58 |
muscle cell | 1.48e-18 | 55 |
electrically responsive cell | 3.55e-17 | 61 |
electrically active cell | 3.55e-17 | 61 |
smooth muscle cell | 1.83e-13 | 43 |
smooth muscle myoblast | 1.83e-13 | 43 |
skin fibroblast | 4.74e-12 | 23 |
vascular associated smooth muscle cell | 6.59e-10 | 32 |
multi fate stem cell | 9.97e-09 | 427 |
somatic stem cell | 3.81e-08 | 433 |
stem cell | 3.67e-07 | 441 |
stromal cell | 6.59e-07 | 28 |