FFCP PHASE1:Hg19::chr14:74965436..74965448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4053 | |EntrezGene=4053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6715 | |HGNC=6715 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=494bp_to_BC062686_5end | |association_with_transcript=494bp_to_BC062686_5end | ||
|cluster_id=chr14:74965436..74965448,- | |||
|description=CAGE_peak_27_at_LTBP2_5end | |description=CAGE_peak_27_at_LTBP2_5end | ||
|id=chr14:74965436..74965448,- | |id=chr14:74965436..74965448,- | ||
|ontology_enrichment_celltype=CL:0000057!5.66e-18!75;CL:0002334!9.56e-15!12;CL:0000055!1.78e-14!180;CL:0002620!4.35e-09!23;CL:0002539!2.81e-07!10;CL:0000723!9.70e-07!436 | |ontology_enrichment_celltype=CL:0000057!5.66e-18!75;CL:0002334!9.56e-15!12;CL:0000055!1.78e-14!180;CL:0002620!4.35e-09!23;CL:0002539!2.81e-07!10;CL:0000723!9.70e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002334;5.37e-39;12!CL:0002580;1.20e-11;3!CL:0002579;2.77e-11;3!CL:0002582;1.92e-10;3!CL:0002539;7.50e-09;10!CL:0002617;7.22e-08;2!CL:0002583;1.63e-07;2!CL:0000057;6.53e-07;73!CL:0002620;8.97e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.80e-39,12;CL:0000057,4.90e-22,76;CL:0002580,1.17e-11,3;CL:0002579,3.82e-11,3;CL:0002582,1.34e-10,3;CL:0002539,6.50e-09,10;CL:0002617,6.11e-08,2;CL:0002583,2.61e-07,2;CL:0000048,4.63e-07,427;CL:0000723,8.08e-07,433;CL:0002620,8.52e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!1.74e-09!21;UBERON:0010191!1.74e-09!21;UBERON:0004237!2.81e-07!10;UBERON:0004695!2.81e-07!10;UBERON:0002111!2.81e-07!10;UBERON:0004178!2.81e-07!10;UBERON:0004573!8.58e-07!33;UBERON:0004571!8.58e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.75e-14;6!UBERON:0002358;1.75e-14;6!UBERON:0003684;1.75e-14;6!UBERON:0001178;1.75e-14;6!UBERON:0004457;9.86e-14;9!UBERON:0000042;9.86e-14;9!UBERON:0004237;7.50e-09;10!UBERON:0004695;7.50e-09;10!UBERON:0002111;7.50e-09;10!UBERON:0004178;7.50e-09;10!UBERON:0000310;1.01e-08;10!UBERON:0001443;6.80e-08;11!UBERON:0000947;2.02e-07;21!UBERON:0010191;2.02e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.28e-14,6;UBERON:0002358,3.28e-14,6;UBERON:0003684,3.28e-14,6;UBERON:0001178,3.28e-14,6;UBERON:0004457,5.86e-10,12;UBERON:0000042,5.86e-10,12;UBERON:0004237,6.50e-09,10;UBERON:0004695,6.50e-09,10;UBERON:0002111,6.50e-09,10;UBERON:0004178,6.50e-09,10;UBERON:0000310,9.21e-09,10;UBERON:0001443,6.25e-08,11;UBERON:0000947,2.08e-07,21;UBERON:0010191,2.08e-07,21 | |||
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| ||
|short_description=p27@LTBP2 | |short_description=p27@LTBP2 | ||
}} | }} |
Latest revision as of 00:57, 16 September 2015
Short description: | p27@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_LTBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 494bp_to_BC062686_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.80e-39 | 12 |
fibroblast | 4.90e-22 | 76 |
preadipocyte of the breast | 1.17e-11 | 3 |
omentum preadipocyte | 3.82e-11 | 3 |
visceral preadipocyte | 1.34e-10 | 3 |
aortic smooth muscle cell | 6.50e-09 | 10 |
adipocyte of breast | 6.11e-08 | 2 |
subcutaneous preadipocyte | 2.61e-07 | 2 |
multi fate stem cell | 4.63e-07 | 427 |
somatic stem cell | 8.08e-07 | 433 |
skin fibroblast | 8.52e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.28e-14 | 6 |
peritoneum | 3.28e-14 | 6 |
abdominal cavity | 3.28e-14 | 6 |
visceral peritoneum | 3.28e-14 | 6 |
cavity lining | 5.86e-10 | 12 |
serous membrane | 5.86e-10 | 12 |
blood vessel smooth muscle | 6.50e-09 | 10 |
arterial system smooth muscle | 6.50e-09 | 10 |
artery smooth muscle tissue | 6.50e-09 | 10 |
aorta smooth muscle tissue | 6.50e-09 | 10 |
breast | 9.21e-09 | 10 |
chest | 6.25e-08 | 11 |
aorta | 2.08e-07 | 21 |
aortic system | 2.08e-07 | 21 |