FFCP PHASE1:Hg19::chr12:105724590..105724612,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35164 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000546866_5end | |||
|cluster_id=chr12:105724590..105724612,+ | |||
|coexpression_cluster_id=C3224 | |||
|description=CAGE_peak_4_at_C12orf75_5end | |||
|id=chr12:105724590..105724612,+ | |||
|ontology_enrichment_celltype=CL:0000144!3.39e-13!625;CL:0000055!1.08e-12!180;CL:0000003!1.21e-12!722;CL:0000057!2.16e-12!75;CL:0002371!7.95e-12!591;CL:0002620!3.90e-11!23;CL:0000542!3.37e-09!53;CL:0000051!3.37e-09!53;CL:0000012!3.65e-09!682;CL:0000838!4.31e-09!52;CL:0000548!5.57e-09!679;CL:0000004!5.57e-09!679;CL:0000255!5.57e-09!679;CL:0000084!1.95e-08!25;CL:0000827!1.95e-08!25;CL:0000048!2.85e-08!430;CL:0000192!7.74e-08!42;CL:0000514!7.74e-08!42;CL:0000723!8.72e-08!436;CL:0000791!1.93e-07!18;CL:0000789!1.93e-07!18;CL:0002420!1.93e-07!18;CL:0002419!1.93e-07!18;CL:0000790!1.93e-07!18;CL:0000034!2.57e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.51e-11;23!CL:0000084;6.47e-09;25!CL:0000791;5.76e-08;18!CL:0000789;5.76e-08;18!CL:0002419;5.76e-08;18!CL:1000507;5.82e-08;10!CL:1000494;5.82e-08;10!CL:0000625;3.97e-07;11!CL:1000497;7.22e-07;17!CL:0002518;7.22e-07;17!CL:1000449;8.67e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.59e-13,427;CL:0000057,3.14e-13,76;CL:0000723,1.42e-12,433;CL:0000034,8.69e-12,441;CL:0002620,1.38e-11,23;CL:0002320,1.88e-09,361;CL:0000134,2.24e-09,354;CL:0000542,3.48e-09,53;CL:0000051,3.48e-09,53;CL:0000838,4.57e-09,52;CL:0000084,6.65e-09,25;CL:0000827,6.65e-09,25;CL:0000192,2.42e-08,43;CL:0000514,2.42e-08,43;CL:0000791,4.87e-08,18;CL:0000789,4.87e-08,18;CL:0002420,4.87e-08,18;CL:0002419,4.87e-08,18;CL:0000790,4.87e-08,18;CL:1000507,6.04e-08,10;CL:1000494,6.04e-08,10;CL:0000359,2.95e-07,32;CL:0000625,4.15e-07,11;CL:0000680,7.50e-07,58;CL:0000056,7.50e-07,58;CL:0000355,7.50e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000790;5.76e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.94e-10!83;UBERON:0002329!9.94e-10!83;UBERON:0003077!9.94e-10!83;UBERON:0003059!9.94e-10!83;UBERON:0007282!9.94e-10!83;UBERON:0009618!9.94e-10!83;UBERON:0007285!9.94e-10!83;UBERON:0005256!1.14e-07!143;UBERON:0004290!1.31e-07!70;UBERON:0002199!7.47e-07!45;UBERON:0002416!7.47e-07!45;UBERON:0000486!7.76e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.82e-08;10!UBERON:0009773;5.82e-08;10!UBERON:0001231;5.82e-08;10!UBERON:0004810;5.82e-08;10!UBERON:0006555;8.67e-07;15!UBERON:0004819;8.67e-07;15!UBERON:0001285;8.67e-07;15!UBERON:0007684;8.67e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.15e-09,371;UBERON:0007503,6.91e-09,78;UBERON:0007524,3.90e-08,73;UBERON:0002329,4.36e-08,71;UBERON:0003059,4.36e-08,71;UBERON:0007282,4.36e-08,71;UBERON:0004290,4.36e-08,71;UBERON:0009618,4.36e-08,71;UBERON:0004810,6.04e-08,10;UBERON:0003077,1.01e-07,72;UBERON:0007285,1.01e-07,72;UBERON:0002199,4.64e-07,46;UBERON:0002416,4.64e-07,46;UBERON:0000486,5.79e-07,83;UBERON:0003102,7.40e-07,99 | |||
|phase1_expression=2.90685406832891,1.49870366723688,0.422863212287913,8.00586386825043,2.23480547213644,5.23403114460221,7.59899634504932,1.89515962028049,0.261185628199839,1.96587149201207,2.79120467188971,4.58726881473362,3.9565046734268,0.74259811776028,1.65698687863958,33.6162573225888,31.3401154572468,33.5942641578192,29.2759679274304,1.72369481307503,5.30401797235058,1.88072832886853,0.85870796139317,3.42186062682211,2.25976751270645,6.41872608282791,5.17233713534658,5.19491156670283,2.75354993794233,7.29275856384704,2.01260960310899,0,0.30120591877825,0.369754010166788,0.697204805222715,0.853015394924529,4.40400659002271,1.66198622559563,1.00272223735071,2.60413044859022,0.447830948479849,0.647787332037959,0.515151135268373,0,0.377875943688809,0,0,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0.376484679085209,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0.75374599577023,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,0,1.70692089026603,1.20118796110804,2.29900975981793,2.64417949113945,4.77026877267682,0.569212969109448,1.17447437874188,1.91136614062614,0,6.1655941927969,4.47752944117631,1.96709770113833,3.14408610199332,3.49522548299166,7.35620579718984,1.62961133316795,0.473447805734733,3.89653456815823,16.9343894465464,10.3112067616193,7.08908462667588,9.20733136801053,13.0653146120189,14.8267656218261,9.53739846701322,15.4756009960075,6.66547097190621,0.889719378972363,0.802622484269139,1.04535523804977,14.0503584944982,6.13152789763074,5.84166657320471,6.32549230048757,7.32700452945422,13.0216690771284,23.7613011112094,10.5402583354441,8.95906278080929,8.74515085866421,10.8917535940248,18.8859439291841,7.25784275609037,13.9068901807424,9.26876184849914,0,0,0.12786256184353,5.42158728576849,1.00267582127178,2.75208386025565,1.5905718941022,1.45990461090791,1.41802225746102,2.66075276955077,2.45937399940753,1.44076983047484,0.364295288292542,1.48313777113772,0,0.174129737299267,0.132957960518865,46.9826529881524,57.7714859887929,66.4908927379921,0.79504962946682,0.860234595106124,0.347140501607594,1.13061588384802,1.25849830862972,0.825354125820202,0.626984899610432,0,1.42306505074684,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0.81014194788176,0.357198913136319,1.34717623575702,0.788280363383256,0,1.89853131913626,0.366403487860815,1.31780417436063,0,0.436094052142534,4.47274756525787,10.6369629798247,2.1185468930115,1.43418310374407,6.38403087957043,0,4.2699598291882,5.42668606517752,0.622422070799533,1.48181739276657,1.30769522490767,0.302714855289863,0,4.21778577300834,6.86752169026705,1.71141546463335,16.4393548606981,6.22402842811954,27.3565275982142,28.6519645672587,2.44985005505872,4.54486974053541,1.85986406116378,3.56400857184616,3.95627086845691,0.910161361938026,4.31170885089743,9.25848626747364,13.5128001461721,2.77064115484183,11.4134181429018,17.1633165647451,2.70428506031874,1.81491493056034,9.32826105582082,12.813443329114,12.2920502672546,11.4034616512073,17.9311400874884,6.95629458123199,26.4285935990858,9.11392194102838,36.8311879509331,11.6119536152293,27.7070194913321,6.7891343863901,30.5308249564288,92.5911782712014,29.5035430620248,1.35282597214308,9.27336810008838,1.72082757233402,0.121973706129595,0.397589304964456,0.464775771478074,0.621966330092223,0.252320850875628,0.36497735907583,6.25798129319264,5.78916844373597,2.76269842704961,4.17931135228781,9.38443326170461,0.236613600079688,0.168584690078102,0.482022059766964,0,0.217879444092406,0.474541238222193,0.404493924480493,0,0,0,9.81692416624121,1.6462960453256,0,0,0,0,4.85609409356116,1.72183813960359,4.11762744716461,2.30475599358114,0,0.904760751704678,0.370353780634118,3.58389135841357,6.23960871167747,1.44331342025273,1.15930404975077,1.6437217193015,0,0,0.380508304469197,0,0.858486162094873,0,0,0.148631162288728,13.1227367581488,5.54341023056236,3.68615252830205,2.32852159027406,1.16253575405585,1.91691339582606,0,0.352193736052904,0,0.432359860250884,0.12624243342638,0.126995788584338,0.763976851116555,1.17217447210047,0,0.514137463516618,0.300343057843917,0,3.81245686774226,2.1798003441664,2.56684000373325,4.39523833576444,0,9.298330278116,8.51001973071586,22.8816361205005,2.05765899409714,5.67396528093113,3.19706614819319,0.142977993658148,0.542621605391443,1.64648067356154,3.25736184293735,1.06617584622764,0.791951872933429,3.01439377059586,3.48613383440118,2.19940580600526,0,0,0,17.7322393063771,12.6348129417525,8.5582143024431,6.9495027200438,3.28762116080613,4.47652408099739,12.329365839288,10.0485687702983,11.2126338926949,11.8075593377368,1.52456774533478,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,1.24324654030811,2.94459580125936,5.50187573165645,0.542530047399471,17.0536106455262,28.5486382075459,14.0355149380202,3.63138386477411,2.10662269809403,4.5481500811197,5.17365356462525,3.32112799267718,2.76553752812555,14.5095636161698,1.76221041716467,2.40200396667599,2.27444828735176,2.37285620900479,6.72383614161699,1.2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| |||
|short_description=p4@C12orf75 | |||
}} |
Latest revision as of 01:32, 16 September 2015
Short description: | p4@C12orf75 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C12orf75_5end |
Coexpression cluster: | C3224_Fibroblast_Dendritic_basal_chronic_leiomyoma_Renal_Aortic |
Association with transcript: | -18bp_to_ENST00000546866_5end |
EntrezGene: | C12orf75 |
HGNC: | 35164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.59e-13 | 427 |
fibroblast | 3.14e-13 | 76 |
somatic stem cell | 1.42e-12 | 433 |
stem cell | 8.69e-12 | 441 |
skin fibroblast | 1.38e-11 | 23 |
connective tissue cell | 1.88e-09 | 361 |
mesenchymal cell | 2.24e-09 | 354 |
lymphocyte | 3.48e-09 | 53 |
common lymphoid progenitor | 3.48e-09 | 53 |
lymphoid lineage restricted progenitor cell | 4.57e-09 | 52 |
T cell | 6.65e-09 | 25 |
pro-T cell | 6.65e-09 | 25 |
smooth muscle cell | 2.42e-08 | 43 |
smooth muscle myoblast | 2.42e-08 | 43 |
mature alpha-beta T cell | 4.87e-08 | 18 |
alpha-beta T cell | 4.87e-08 | 18 |
immature T cell | 4.87e-08 | 18 |
mature T cell | 4.87e-08 | 18 |
immature alpha-beta T cell | 4.87e-08 | 18 |
kidney tubule cell | 6.04e-08 | 10 |
nephron tubule epithelial cell | 6.04e-08 | 10 |
vascular associated smooth muscle cell | 2.95e-07 | 32 |
CD8-positive, alpha-beta T cell | 4.15e-07 | 11 |
muscle precursor cell | 7.50e-07 | 58 |
myoblast | 7.50e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.50e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.15e-09 | 371 |
epithelial vesicle | 6.91e-09 | 78 |
dense mesenchyme tissue | 3.90e-08 | 73 |
somite | 4.36e-08 | 71 |
presomitic mesoderm | 4.36e-08 | 71 |
presumptive segmental plate | 4.36e-08 | 71 |
dermomyotome | 4.36e-08 | 71 |
trunk paraxial mesoderm | 4.36e-08 | 71 |
nephron tubule epithelium | 6.04e-08 | 10 |
paraxial mesoderm | 1.01e-07 | 72 |
presumptive paraxial mesoderm | 1.01e-07 | 72 |
integument | 4.64e-07 | 46 |
integumental system | 4.64e-07 | 46 |
multilaminar epithelium | 5.79e-07 | 83 |
surface structure | 7.40e-07 | 99 |