FFCP PHASE1:Hg19::chr12:105724590..105724612,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387882 | |EntrezGene=387882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35164 | |HGNC=35164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000546866_5end | |association_with_transcript=-18bp_to_ENST00000546866_5end | ||
|cluster_id=chr12:105724590..105724612,+ | |||
|coexpression_cluster_id=C3224 | |||
|description=CAGE_peak_4_at_C12orf75_5end | |description=CAGE_peak_4_at_C12orf75_5end | ||
|id=chr12:105724590..105724612,+ | |id=chr12:105724590..105724612,+ | ||
|ontology_enrichment_celltype=CL:0000144!3.39e-13!625;CL:0000055!1.08e-12!180;CL:0000003!1.21e-12!722;CL:0000057!2.16e-12!75;CL:0002371!7.95e-12!591;CL:0002620!3.90e-11!23;CL:0000542!3.37e-09!53;CL:0000051!3.37e-09!53;CL:0000012!3.65e-09!682;CL:0000838!4.31e-09!52;CL:0000548!5.57e-09!679;CL:0000004!5.57e-09!679;CL:0000255!5.57e-09!679;CL:0000084!1.95e-08!25;CL:0000827!1.95e-08!25;CL:0000048!2.85e-08!430;CL:0000192!7.74e-08!42;CL:0000514!7.74e-08!42;CL:0000723!8.72e-08!436;CL:0000791!1.93e-07!18;CL:0000789!1.93e-07!18;CL:0002420!1.93e-07!18;CL:0002419!1.93e-07!18;CL:0000790!1.93e-07!18;CL:0000034!2.57e-07!444 | |ontology_enrichment_celltype=CL:0000144!3.39e-13!625;CL:0000055!1.08e-12!180;CL:0000003!1.21e-12!722;CL:0000057!2.16e-12!75;CL:0002371!7.95e-12!591;CL:0002620!3.90e-11!23;CL:0000542!3.37e-09!53;CL:0000051!3.37e-09!53;CL:0000012!3.65e-09!682;CL:0000838!4.31e-09!52;CL:0000548!5.57e-09!679;CL:0000004!5.57e-09!679;CL:0000255!5.57e-09!679;CL:0000084!1.95e-08!25;CL:0000827!1.95e-08!25;CL:0000048!2.85e-08!430;CL:0000192!7.74e-08!42;CL:0000514!7.74e-08!42;CL:0000723!8.72e-08!436;CL:0000791!1.93e-07!18;CL:0000789!1.93e-07!18;CL:0002420!1.93e-07!18;CL:0002419!1.93e-07!18;CL:0000790!1.93e-07!18;CL:0000034!2.57e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.51e-11;23!CL:0000084;6.47e-09;25!CL:0000791;5.76e-08;18!CL:0000789;5.76e-08;18!CL:0002419;5.76e-08;18!CL:1000507;5.82e-08;10!CL:1000494;5.82e-08;10!CL:0000625;3.97e-07;11!CL:1000497;7.22e-07;17!CL:0002518;7.22e-07;17!CL:1000449;8.67e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.59e-13,427;CL:0000057,3.14e-13,76;CL:0000723,1.42e-12,433;CL:0000034,8.69e-12,441;CL:0002620,1.38e-11,23;CL:0002320,1.88e-09,361;CL:0000134,2.24e-09,354;CL:0000542,3.48e-09,53;CL:0000051,3.48e-09,53;CL:0000838,4.57e-09,52;CL:0000084,6.65e-09,25;CL:0000827,6.65e-09,25;CL:0000192,2.42e-08,43;CL:0000514,2.42e-08,43;CL:0000791,4.87e-08,18;CL:0000789,4.87e-08,18;CL:0002420,4.87e-08,18;CL:0002419,4.87e-08,18;CL:0000790,4.87e-08,18;CL:1000507,6.04e-08,10;CL:1000494,6.04e-08,10;CL:0000359,2.95e-07,32;CL:0000625,4.15e-07,11;CL:0000680,7.50e-07,58;CL:0000056,7.50e-07,58;CL:0000355,7.50e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000790;5.76e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.94e-10!83;UBERON:0002329!9.94e-10!83;UBERON:0003077!9.94e-10!83;UBERON:0003059!9.94e-10!83;UBERON:0007282!9.94e-10!83;UBERON:0009618!9.94e-10!83;UBERON:0007285!9.94e-10!83;UBERON:0005256!1.14e-07!143;UBERON:0004290!1.31e-07!70;UBERON:0002199!7.47e-07!45;UBERON:0002416!7.47e-07!45;UBERON:0000486!7.76e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.82e-08;10!UBERON:0009773;5.82e-08;10!UBERON:0001231;5.82e-08;10!UBERON:0004810;5.82e-08;10!UBERON:0006555;8.67e-07;15!UBERON:0004819;8.67e-07;15!UBERON:0001285;8.67e-07;15!UBERON:0007684;8.67e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.15e-09,371;UBERON:0007503,6.91e-09,78;UBERON:0007524,3.90e-08,73;UBERON:0002329,4.36e-08,71;UBERON:0003059,4.36e-08,71;UBERON:0007282,4.36e-08,71;UBERON:0004290,4.36e-08,71;UBERON:0009618,4.36e-08,71;UBERON:0004810,6.04e-08,10;UBERON:0003077,1.01e-07,72;UBERON:0007285,1.01e-07,72;UBERON:0002199,4.64e-07,46;UBERON:0002416,4.64e-07,46;UBERON:0000486,5.79e-07,83;UBERON:0003102,7.40e-07,99 | |||
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| ||
|short_description=p4@C12orf75 | |short_description=p4@C12orf75 | ||
}} | }} |
Latest revision as of 01:32, 16 September 2015
Short description: | p4@C12orf75 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C12orf75_5end |
Coexpression cluster: | C3224_Fibroblast_Dendritic_basal_chronic_leiomyoma_Renal_Aortic |
Association with transcript: | -18bp_to_ENST00000546866_5end |
EntrezGene: | C12orf75 |
HGNC: | 35164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.59e-13 | 427 |
fibroblast | 3.14e-13 | 76 |
somatic stem cell | 1.42e-12 | 433 |
stem cell | 8.69e-12 | 441 |
skin fibroblast | 1.38e-11 | 23 |
connective tissue cell | 1.88e-09 | 361 |
mesenchymal cell | 2.24e-09 | 354 |
lymphocyte | 3.48e-09 | 53 |
common lymphoid progenitor | 3.48e-09 | 53 |
lymphoid lineage restricted progenitor cell | 4.57e-09 | 52 |
T cell | 6.65e-09 | 25 |
pro-T cell | 6.65e-09 | 25 |
smooth muscle cell | 2.42e-08 | 43 |
smooth muscle myoblast | 2.42e-08 | 43 |
mature alpha-beta T cell | 4.87e-08 | 18 |
alpha-beta T cell | 4.87e-08 | 18 |
immature T cell | 4.87e-08 | 18 |
mature T cell | 4.87e-08 | 18 |
immature alpha-beta T cell | 4.87e-08 | 18 |
kidney tubule cell | 6.04e-08 | 10 |
nephron tubule epithelial cell | 6.04e-08 | 10 |
vascular associated smooth muscle cell | 2.95e-07 | 32 |
CD8-positive, alpha-beta T cell | 4.15e-07 | 11 |
muscle precursor cell | 7.50e-07 | 58 |
myoblast | 7.50e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.50e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.15e-09 | 371 |
epithelial vesicle | 6.91e-09 | 78 |
dense mesenchyme tissue | 3.90e-08 | 73 |
somite | 4.36e-08 | 71 |
presomitic mesoderm | 4.36e-08 | 71 |
presumptive segmental plate | 4.36e-08 | 71 |
dermomyotome | 4.36e-08 | 71 |
trunk paraxial mesoderm | 4.36e-08 | 71 |
nephron tubule epithelium | 6.04e-08 | 10 |
paraxial mesoderm | 1.01e-07 | 72 |
presumptive paraxial mesoderm | 1.01e-07 | 72 |
integument | 4.64e-07 | 46 |
integumental system | 4.64e-07 | 46 |
multilaminar epithelium | 5.79e-07 | 83 |
surface structure | 7.40e-07 | 99 |