FFCP PHASE1:Hg19::chr16:28995162..28995186,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:28995162..28995186,+
|short_description=p10@LAT
|description=CAGE_peak_10_at_LAT_5end
|association_with_transcript=-339bp_to_uc002dsb.2,uc002dsc.2,uc002ds...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27040 | |EntrezGene=27040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18874 | |HGNC=18874 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-339bp_to_uc002dsb.2,uc002dsc.2,uc002dsd.2_5end | |||
|cluster_id=chr16:28995162..28995186,+ | |||
|coexpression_cluster_id=C3550 | |||
|description=CAGE_peak_10_at_LAT_5end | |||
|id=chr16:28995162..28995186,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.34e-12!112;CL:0000049!1.34e-12!112;CL:0002274!1.77e-12!5;CL:0000457!1.77e-12!5;CL:0002191!1.77e-12!5;CL:0000097!1.77e-12!5;CL:0000831!1.77e-12!5;CL:0002028!1.77e-12!5;CL:0002032!2.13e-08!165;CL:0000837!2.13e-08!165;CL:0000037!2.54e-08!172;CL:0000566!2.54e-08!172;CL:0000988!5.87e-08!182;CL:0000766!3.55e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.31e-43;5!CL:0000163;3.08e-24;9!CL:0000763;1.83e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.10e-43,5;CL:0002028,1.10e-43,5;CL:0000163,2.79e-24,9;CL:0000763,4.77e-23,108;CL:0000049,4.77e-23,108;CL:0002032,1.59e-14,161;CL:0000837,1.59e-14,161;CL:0000037,8.50e-14,168;CL:0000988,6.05e-13,177;CL:0000766,2.44e-08,72;CL:0000839,2.81e-07,66;CL:0000557,3.73e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000049;1.15e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!1.59e-13!31;DOID:1240!6.61e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.80e-36;31!DOID:1240;1.49e-19;39!DOID:2531;2.75e-11;51!DOID:0060083;2.75e-11;51!DOID:9119;1.80e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.17e-38,31;DOID:1240,2.43e-30,39;DOID:2531,9.53e-23,51;DOID:0060083,9.53e-23,51;DOID:9119,1.80e-10,1;DOID:0050686,1.60e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.87e-07!102;UBERON:0003061!1.87e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.674170453335254,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0.267540828089713,0,0.226618685395132,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,1.97065295158377,4.49047013467453,4.97587477297853,5.18831832301061,6.18587923789262,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,2.99161459204025,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.50787533340481,4.33587802779989,3.63239472943886,6.38769356535489,0,3.37964840739304,2.23676107892416,2.16903884225481,0,11.6930593036002,0,9.73640442513539,12.989806751915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,19.951322438848,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.46112780877612,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,2.70192184266644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32930774541437,0.992975867626496,0,0,0,0.138674673013139,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,3.10631338913581,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,2.70905318472819,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,3.62310824560016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.674170453335254,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0.267540828089713,0,0.226618685395132,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,1.97065295158377,4.49047013467453,4.97587477297853,5.18831832301061,6.18587923789262,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,2.99161459204025,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.50787533340481,4.33587802779989,3.63239472943886,6.38769356535489,0,3.37964840739304,2.23676107892416,2.16903884225481,0,11.6930593036002,0,9.73640442513539,12.989806751915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,19.951322438848,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.46112780877612,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,2.70192184266644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32930774541437,0.992975867626496,0,0,0,0.138674673013139,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,3.10631338913581,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,2.70905318472819,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,3.62310824560016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@LAT | |||
}} | }} |
Latest revision as of 01:50, 16 September 2015
Short description: | p10@LAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LAT_5end |
Coexpression cluster: | C3550_biphenotypic_small_acute_Mast_leukemia_blood_chronic |
Association with transcript: | -339bp_to_uc002dsb.2, uc002dsc.2, uc002dsd.2_5end |
EntrezGene: | LAT |
HGNC: | 18874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.10e-43 | 5 |
basophil mast progenitor cell | 1.10e-43 | 5 |
endocrine cell | 2.79e-24 | 9 |
myeloid cell | 4.77e-23 | 108 |
common myeloid progenitor | 4.77e-23 | 108 |
hematopoietic oligopotent progenitor cell | 1.59e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-14 | 161 |
hematopoietic stem cell | 8.50e-14 | 168 |
hematopoietic cell | 6.05e-13 | 177 |
myeloid leukocyte | 2.44e-08 | 72 |
myeloid lineage restricted progenitor cell | 2.81e-07 | 66 |
granulocyte monocyte progenitor cell | 3.73e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.17e-38 | 31 |
leukemia | 2.43e-30 | 39 |
hematologic cancer | 9.53e-23 | 51 |
immune system cancer | 9.53e-23 | 51 |
acute myeloid leukemia | 1.80e-10 | 1 |
organ system cancer | 1.60e-08 | 137 |