FFCP PHASE1:Hg19::chr16:28995194..28995207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27040 | |EntrezGene=27040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18874 | |HGNC=18874 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-318bp_to_uc002dsb.2,uc002dsc.2,uc002dsd.2_5end | |association_with_transcript=-318bp_to_uc002dsb.2,uc002dsc.2,uc002dsd.2_5end | ||
|cluster_id=chr16:28995194..28995207,+ | |||
|coexpression_cluster_id=C3550 | |||
|description=CAGE_peak_8_at_LAT_5end | |description=CAGE_peak_8_at_LAT_5end | ||
|id=chr16:28995194..28995207,+ | |id=chr16:28995194..28995207,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.89e-12!172;CL:0000566!4.89e-12!172;CL:0000763!1.09e-11!112;CL:0000049!1.09e-11!112;CL:0002274!1.28e-11!5;CL:0000457!1.28e-11!5;CL:0002191!1.28e-11!5;CL:0000097!1.28e-11!5;CL:0000831!1.28e-11!5;CL:0002028!1.28e-11!5;CL:0000988!1.97e-11!182;CL:0002032!1.04e-10!165;CL:0000837!1.04e-10!165;CL:0000094!1.27e-08!8;CL:0000738!6.87e-07!140;CL:0000766!8.29e-07!76 | |ontology_enrichment_celltype=CL:0000037!4.89e-12!172;CL:0000566!4.89e-12!172;CL:0000763!1.09e-11!112;CL:0000049!1.09e-11!112;CL:0002274!1.28e-11!5;CL:0000457!1.28e-11!5;CL:0002191!1.28e-11!5;CL:0000097!1.28e-11!5;CL:0000831!1.28e-11!5;CL:0002028!1.28e-11!5;CL:0000988!1.97e-11!182;CL:0002032!1.04e-10!165;CL:0000837!1.04e-10!165;CL:0000094!1.27e-08!8;CL:0000738!6.87e-07!140;CL:0000766!8.29e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.57e-30;5!CL:0000163;6.81e-17;9!CL:0000763;2.68e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.39e-30,5;CL:0002028,1.39e-30,5;CL:0000763,6.37e-20,108;CL:0000049,6.37e-20,108;CL:0000163,6.38e-17,9;CL:0002032,5.91e-12,161;CL:0000837,5.91e-12,161;CL:0000037,2.81e-11,168;CL:0000988,1.74e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000049;2.02e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!1.62e-12!31;DOID:1240!4.40e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.02e-33;31!DOID:1240;8.45e-18;39!DOID:2531;1.73e-10;51!DOID:0060083;1.73e-10;51!DOID:9119;1.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.44e-35,31;DOID:1240,1.70e-27,39;DOID:2531,2.41e-20,51;DOID:0060083,2.41e-20,51;DOID:9119,1.12e-07,1;DOID:0050686,8.71e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.75e-17!15;UBERON:0000179!1.75e-17!15;UBERON:0000463!1.75e-17!15;UBERON:0002390!4.60e-10!102;UBERON:0003061!4.60e-10!102;UBERON:0002193!5.17e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.05e-13;15!UBERON:0000179;2.05e-13;15!UBERON:0000463;2.05e-13;15!UBERON:0002171;5.84e-07;1!UBERON:0006518;5.84e-07;1!UBERON:0008949;5.84e-07;1!UBERON:0000101;5.84e-07;1!UBERON:0002167;5.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.33e-13,15;UBERON:0000179,2.33e-13,15;UBERON:0000463,2.33e-13,15;UBERON:0002390,2.47e-10,98;UBERON:0003061,2.47e-10,98;UBERON:0002193,4.13e-09,108;UBERON:0002171,6.97e-07,1;UBERON:0006518,6.97e-07,1;UBERON:0008949,6.97e-07,1;UBERON:0000101,6.97e-07,1;UBERON:0002167,6.97e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0,0,0,0.334231370655521,0,0.221533894583621,0,0.512365278902701,0.130059347559878,0.328875809207352,0,0.579606171470105,0.296573126324121,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0.318565414324097,0,0,0,0.383959833463255,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41929561685538,5.89924507888615,13.8909837412317,13.9796354814453,14.1391525437546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.213455115606889,0,1.66435439510497,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,5.07447609232169,1.52927441428475,0.569647187174163,0.714695326373367,1.23408681925858,1.29694662238543,0.540031437238115,3.96562588147135,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5317238545034,1.86220955581764,8.51116798049608,4.237793851012,6.81353980304522,0,7.06653757909453,4.92087437363315,8.17560794388352,0,11.4146531297049,0,15.1455179946551,16.3205264318932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6017632517973,0,7.18449277040819,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0,0,0,0,0,3.49660473756833,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,2.31694369112849,1.56966459203613,2.38944859545918,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,2.23654564017779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,5.17182880720835,0,0,0,0,0,0,0,0,0.106787412567695,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,17.0588013230341,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 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| ||
|short_description=p8@LAT | |short_description=p8@LAT | ||
}} | }} |
Latest revision as of 01:50, 16 September 2015
Short description: | p8@LAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LAT_5end |
Coexpression cluster: | C3550_biphenotypic_small_acute_Mast_leukemia_blood_chronic |
Association with transcript: | -318bp_to_uc002dsb.2, uc002dsc.2, uc002dsd.2_5end |
EntrezGene: | LAT |
HGNC: | 18874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.39e-30 | 5 |
basophil mast progenitor cell | 1.39e-30 | 5 |
myeloid cell | 6.37e-20 | 108 |
common myeloid progenitor | 6.37e-20 | 108 |
endocrine cell | 6.38e-17 | 9 |
hematopoietic oligopotent progenitor cell | 5.91e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.91e-12 | 161 |
hematopoietic stem cell | 2.81e-11 | 168 |
hematopoietic cell | 1.74e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 2.33e-13 | 15 |
haemolymphatic fluid | 2.33e-13 | 15 |
organism substance | 2.33e-13 | 15 |
hematopoietic system | 2.47e-10 | 98 |
blood island | 2.47e-10 | 98 |
hemolymphoid system | 4.13e-09 | 108 |
lower lobe of right lung | 6.97e-07 | 1 |
right lung lobe | 6.97e-07 | 1 |
lower lobe of lung | 6.97e-07 | 1 |
lobe of lung | 6.97e-07 | 1 |
right lung | 6.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.44e-35 | 31 |
leukemia | 1.70e-27 | 39 |
hematologic cancer | 2.41e-20 | 51 |
immune system cancer | 2.41e-20 | 51 |
acute myeloid leukemia | 1.12e-07 | 1 |
organ system cancer | 8.71e-07 | 137 |