FFCP PHASE1:Hg19::chr16:28996416..28996444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27040 | |EntrezGene=27040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18874 | |HGNC=18874 | ||
|TSSclassifier=strong | |||
|UniProt=O43561 | |UniProt=O43561 | ||
|association_with_transcript=1bp_to_ENST00000360872_5end | |association_with_transcript=1bp_to_ENST00000360872_5end | ||
|cluster_id=chr16:28996416..28996444,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_LAT_5end | |description=CAGE_peak_2_at_LAT_5end | ||
|id=chr16:28996416..28996444,+ | |id=chr16:28996416..28996444,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.31e-49!172;CL:0000566!1.31e-49!172;CL:0000988!7.06e-48!182;CL:0002032!2.32e-46!165;CL:0000837!2.32e-46!165;CL:0000738!1.83e-43!140;CL:0002031!9.24e-39!124;CL:0002087!1.98e-36!119;CL:0000763!2.82e-24!112;CL:0000049!2.82e-24!112;CL:0000084!1.80e-21!25;CL:0000827!1.80e-21!25;CL:0000542!1.20e-20!53;CL:0000051!1.20e-20!53;CL:0000838!1.55e-20!52;CL:0000766!2.02e-19!76;CL:0000839!2.86e-18!70;CL:0000791!8.17e-17!18;CL:0000789!8.17e-17!18;CL:0002420!8.17e-17!18;CL:0002419!8.17e-17!18;CL:0000790!8.17e-17!18;CL:0000557!2.04e-16!71;CL:0002194!5.56e-14!63;CL:0000576!5.56e-14!63;CL:0000040!5.56e-14!63;CL:0000559!5.56e-14!63;CL:0002009!1.10e-13!65;CL:0000625!4.77e-11!11;CL:0002057!1.44e-10!42;CL:0000860!3.64e-09!45 | |ontology_enrichment_celltype=CL:0000037!1.31e-49!172;CL:0000566!1.31e-49!172;CL:0000988!7.06e-48!182;CL:0002032!2.32e-46!165;CL:0000837!2.32e-46!165;CL:0000738!1.83e-43!140;CL:0002031!9.24e-39!124;CL:0002087!1.98e-36!119;CL:0000763!2.82e-24!112;CL:0000049!2.82e-24!112;CL:0000084!1.80e-21!25;CL:0000827!1.80e-21!25;CL:0000542!1.20e-20!53;CL:0000051!1.20e-20!53;CL:0000838!1.55e-20!52;CL:0000766!2.02e-19!76;CL:0000839!2.86e-18!70;CL:0000791!8.17e-17!18;CL:0000789!8.17e-17!18;CL:0002420!8.17e-17!18;CL:0002419!8.17e-17!18;CL:0000790!8.17e-17!18;CL:0000557!2.04e-16!71;CL:0002194!5.56e-14!63;CL:0000576!5.56e-14!63;CL:0000040!5.56e-14!63;CL:0000559!5.56e-14!63;CL:0002009!1.10e-13!65;CL:0000625!4.77e-11!11;CL:0002057!1.44e-10!42;CL:0000860!3.64e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000084;8.97e-29;25!CL:0000791;2.23e-22;18!CL:0000789;2.23e-22;18!CL:0002419;2.23e-22;18!CL:0000625;1.67e-14;11!CL:0000542;5.19e-09;53!CL:0000738;7.08e-09;136!CL:0000860;1.09e-08;33!CL:0002057;1.09e-08;33!CL:0000624;1.51e-08;6!CL:0002087;1.66e-08;104!CL:0000473;2.76e-08;39!CL:0000234;2.76e-08;39!CL:0000766;1.85e-07;69!CL:0000763;2.49e-07;100!CL:0000097;2.76e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.50e-41,168;CL:0000988,3.16e-39,177;CL:0002032,7.14e-38,161;CL:0000837,7.14e-38,161;CL:0000738,2.62e-36,136;CL:0002031,1.54e-30,120;CL:0000084,9.81e-29,25;CL:0000827,9.81e-29,25;CL:0002087,1.06e-27,115;CL:0000791,2.29e-22,18;CL:0000789,2.29e-22,18;CL:0002420,2.29e-22,18;CL:0002419,2.29e-22,18;CL:0000790,2.29e-22,18;CL:0000763,7.14e-22,108;CL:0000049,7.14e-22,108;CL:0000766,7.74e-18,72;CL:0000839,4.95e-16,66;CL:0000838,2.78e-15,52;CL:0000542,8.55e-15,53;CL:0000051,8.55e-15,53;CL:0000625,1.70e-14,11;CL:0000557,1.18e-13,67;CL:0002194,4.66e-11,59;CL:0000576,4.66e-11,59;CL:0000040,4.66e-11,59;CL:0000559,4.66e-11,59;CL:0002009,2.14e-10,61;CL:0000473,4.35e-10,48;CL:0000234,4.35e-10,48;CL:0000624,1.51e-08,6;CL:0000860,2.38e-08,42;CL:0002057,2.38e-08,42;CL:0000097,2.79e-07,5;CL:0002028,2.79e-07,5;CL:0000134,7.57e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;2.23e-22;18!CL:0000051;5.19e-09;53 | |||
|ontology_enrichment_disease=DOID:1240!1.52e-09!39;DOID:2531!8.44e-09!51;DOID:0060083!8.44e-09!51 | |ontology_enrichment_disease=DOID:1240!1.52e-09!39;DOID:2531!8.44e-09!51;DOID:0060083!8.44e-09!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.64e-25!102;UBERON:0003061!2.64e-25!102;UBERON:0002193!6.04e-24!112;UBERON:0002371!9.70e-14!80;UBERON:0001474!9.38e-13!86;UBERON:0002405!1.19e-11!115;UBERON:0000178!2.16e-11!15;UBERON:0000179!2.16e-11!15;UBERON:0000463!2.16e-11!15;UBERON:0007023!8.79e-10!115;UBERON:0004765!9.30e-09!101;UBERON:0001434!9.30e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.42e-13;15!UBERON:0000179;1.42e-13;15!UBERON:0000463;1.42e-13;15!UBERON:0002390;1.98e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.00e-23,98;UBERON:0003061,1.00e-23,98;UBERON:0002193,6.15e-22,108;UBERON:0000178,1.68e-13,15;UBERON:0000179,1.68e-13,15;UBERON:0000463,1.68e-13,15;UBERON:0002405,4.57e-13,93;UBERON:0002371,9.59e-11,76;UBERON:0001474,7.55e-10,82;UBERON:0004765,4.59e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.656804715599566,0.314843125254717,12.9810211360138,23.7974226820272,12.3852898652861,0,0,0,0.154934401160603,0,0.587200878669695,8.30993112797816,14.6397446653203,11.2845652772243,2.68698569087909,10.0407036465884,2.31818010870768,4.36194716338694,3.40088349319928,3.15359279544161,3.0215774797739,5.75635043230556,4.02618282163635,0.28769239232215,2.0492856522328,1.18241114944293,0.344745680736619,3.22742341791913,1.35426486594342,1.69418105588344,6.82265375144614,3.14612878223118,2.44867113896722,7.06043859567406,3.19668562899521,0,0.598390972864896,0,0.870627715885752,4.53908179752912,1.86846674698672,0.75374599577023,1.5644487552606,1.08594422352558,2.42159801053347,2.57794345191295,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0,0,0,0.39783335439818,0,0,0.546138611262131,0.889509253863555,0.853460445133014,0,1.14950487990897,0,2.86216126360609,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,11.2101712596307,2.37045676297569,55.4721551721009,48.3403238181473,64.1476676878469,76.9057878797119,53.4512517279088,64.3889015799237,81.8272259313228,104.391598101408,71.5892355163854,84.182879941776,75.8250818542044,89.920106447424,90.1311278589956,75.641436117691,75.4435548555366,78.8264393199343,86.8959260129674,72.2360235842225,110.807655233275,88.2679779614041,82.775626618015,91.7485279438622,81.4723408302799,88.2426197677748,74.8745971934881,78.8875196892151,66.8553528705311,76.2800202480334,66.2132850727433,65.3505215641487,60.7634717721574,56.0466746164756,47.3369146536808,49.9644193395657,0,0,0,0,0,0,0,0,0,0,0.263504357079378,1.83370705696798,0,0,1.9472843619281,2.08955684759121,2.39324328933957,0.238490624305342,0,1.48583000531826,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,19.8658394736593,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0.738651018262192,27.61250328643,9.36376322418988,0,0,0,0,0,0,26.111151608485,79.3316390459167,61.7837784311501,55.1979421586962,70.44327785192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,0.502257091432126,4.21667878966063,0,0,0,0,0,0,18.9423893349061,41.9675519230105,46.7911837445153,43.8933184076739,0,0,0,0,0,0,2.99161459204025,6.63064821497657,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,40.5265331200859,20.27713487695,36.2873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,3.50815802633495,3.39866086332371,0,0,0,1.854738209659,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,33.4915422093232,38.9964975642611,38.736008727843,35.9729980941261,25.9158232044302,43.4477118499121,42.6624835418111,41.2425091673021,0,0,0,0.185803175125719,0.144269212976445,11.5249786224431,50.6975547277655,0,0.5745161103971,4.86849240264931,0,0.561594356226918,0,0,5.01268954180134,1.01575066680962,2.08764497634809,0.605399121573143,2.12923118845163,0.343505344755765,0.614481528616916,0.894704431569664,0.667396566847634,8.59707619768977,27.0053988678385,3.69262196843137,43.8138199131093,3.99686361597384,0,0,0.879049075631364,0,7.35526336231357,0,0,0,0,0,0,0,1.31843099381408,0,1.79323189425963,8.84108529699673,0,0,0,0,0,0,0.511572370226872,0.789147245095469,31.1328020051022,0,0,0.371072392647405,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815439456455,0,0,0,0,0.638002319463839,0,1.06606955203727,42.9211852422093,2.35470384592537,9.1416425045086,0,0,0,0,14.7811018451752,2.10998064528027,0,0,0,0.995261931078505,2.29989667708682,3.05515072466813,0.593042257361244,1.35920332841153,2.08843899010911,0.067401132980677,0,0,0,0,0,0,9.67925728389311,0,1.64285107034069,0,0,5.98188485436467,3.30991955875499,5.02292669451561,5.97362148864794,1.42304773014896,0,0,0,0,0.698906672968121,0,0,0,0,1.74580229679155,0,0,3.01492234222852,0,0.0633107959558787,0.391102765469606,0.480952921509202,1.28071796843612,0.39961921916426,0,0,0,0,12.3010010209778,0,3.80531777006119,3.66109962093166,0,5.20111061822734,0,0.136905378891993,0,0,24.1856365936969,0,0.458320848023367,0.717873024576814,0.199679000498991,0,0.223171457441873,0.873385142327441,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.945668487590378,0.524545881349981,8.55362725807193,0,0,0.714695326373367,0,0,0,0,0,0,62.718685852495,0,1.69968137280189,0.732761168390412,0,0,0.26446520348538,0,0,2.66968531419237,1.57204305099666,4.14239055347196,10.419486458051,0.592834895693833,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.372578417648301,0,3.99937305478741,1.364842057874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| ||
|short_description=p2@LAT | |short_description=p2@LAT | ||
}} | }} |
Latest revision as of 01:59, 16 September 2015
Short description: | p2@LAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAT_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 1bp_to_ENST00000360872_5end |
EntrezGene: | LAT |
HGNC: | 18874 |
UniProt: | O43561 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.00e-23 | 98 |
blood island | 1.00e-23 | 98 |
hemolymphoid system | 6.15e-22 | 108 |
blood | 1.68e-13 | 15 |
haemolymphatic fluid | 1.68e-13 | 15 |
organism substance | 1.68e-13 | 15 |
immune system | 4.57e-13 | 93 |
bone marrow | 9.59e-11 | 76 |
bone element | 7.55e-10 | 82 |
skeletal element | 4.59e-08 | 90 |