FFCP PHASE1:Hg19::chr11:118868756..118868770,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338657 | |EntrezGene=338657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30460 | |HGNC=30460 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UT8 | |UniProt=Q86UT8 | ||
|association_with_transcript=-81bp_to_ENST00000334418,NM_198489,uc001pul.2,uc010ryk.1,uc010ryl.1,uc010rym.1_5end | |association_with_transcript=-81bp_to_ENST00000334418,NM_198489,uc001pul.2,uc010ryk.1,uc010ryl.1,uc010rym.1_5end | ||
|cluster_id=chr11:118868756..118868770,+ | |||
|description=CAGE_peak_2_at_CCDC84_5end | |description=CAGE_peak_2_at_CCDC84_5end | ||
|id=chr11:118868756..118868770,+ | |id=chr11:118868756..118868770,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.72e-07;7!CL:0000126;1.72e-07;7!CL:0000127;1.72e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.09e-07,7;CL:0000126,2.09e-07,7;CL:0000127,2.09e-07,7;CL:0002453,2.09e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!2.28e-13!173;UBERON:0006601!2.28e-13!173;UBERON:0004121!2.45e-12!169;UBERON:0002346!2.49e-11!90;UBERON:0000064!8.64e-11!219;UBERON:0000475!1.92e-10!365;UBERON:0003075!3.16e-10!86;UBERON:0007284!3.16e-10!86;UBERON:0000073!7.90e-10!94;UBERON:0001016!7.90e-10!94;UBERON:0000033!3.13e-09!123;UBERON:0000955!5.56e-09!69;UBERON:0006238!5.56e-09!69;UBERON:0001017!5.62e-09!82;UBERON:0005743!8.10e-09!86;UBERON:0000153!8.33e-09!129;UBERON:0007811!8.33e-09!129;UBERON:0001049!1.01e-07!57;UBERON:0005068!1.01e-07!57;UBERON:0006241!1.01e-07!57;UBERON:0007135!1.01e-07!57;UBERON:0002616!1.33e-07!59;UBERON:0003056!9.08e-07!61 | |ontology_enrichment_uberon=UBERON:0000924!2.28e-13!173;UBERON:0006601!2.28e-13!173;UBERON:0004121!2.45e-12!169;UBERON:0002346!2.49e-11!90;UBERON:0000064!8.64e-11!219;UBERON:0000475!1.92e-10!365;UBERON:0003075!3.16e-10!86;UBERON:0007284!3.16e-10!86;UBERON:0000073!7.90e-10!94;UBERON:0001016!7.90e-10!94;UBERON:0000033!3.13e-09!123;UBERON:0000955!5.56e-09!69;UBERON:0006238!5.56e-09!69;UBERON:0001017!5.62e-09!82;UBERON:0005743!8.10e-09!86;UBERON:0000153!8.33e-09!129;UBERON:0007811!8.33e-09!129;UBERON:0001049!1.01e-07!57;UBERON:0005068!1.01e-07!57;UBERON:0006241!1.01e-07!57;UBERON:0007135!1.01e-07!57;UBERON:0002616!1.33e-07!59;UBERON:0003056!9.08e-07!61 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.14e-08,89;UBERON:0001017,2.65e-08,81;UBERON:0000955,2.84e-08,68;UBERON:0006238,2.84e-08,68;UBERON:0004121,3.47e-08,171;UBERON:0000924,3.47e-08,171;UBERON:0006601,3.47e-08,171;UBERON:0002346,3.77e-07,86 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.845726424575827,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0.982935746006035,0.697801167972428,1.52908960491121,0.791300934685361,0.247532705920093,0.662794751455832,0,0,0,0.487932798790507,2.46242116153576,0.816002764977012,1.25381888591235,3.72106783270374,3.96935832711364,3.01302335027527,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0.919421224478927,0,0,0,0.142169232487422,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0.263384084775077,0.393419540227666,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0.802622484269139,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,1.00803371612366,0.802320587350522,0.289648807765598,0,0,0.383587685530591,0,0.50133791063589,0.434539556882471,2.3858578411533,0.973269740605272,1.22895262313288,1.55210578223795,1.58102614247627,0.654895377488563,0.364295288292542,0.741568885568859,0,0.174129737299267,0,0.476981248610684,0,1.11437250398869,0.39752481473341,0,1.38856200643038,1.13061588384802,0,0.550236083880135,0.835979866147242,2.06733407335463,2.49036383880697,1.00416183829401,1.61131726843659,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,1.07159673940896,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.759783069987479,4.10468460520978,2.29469296599051,0,0,0,1.48000529050296,0.933633106199299,0.404132016209064,0,1.05950199351452,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.352303495931295,0.323745888736263,0.421352420106746,0.61246251376468,0.491337269247072,0.309977343527296,0,0,0,0,0,0.250237039743928,0.554128230968366,0.438977620880838,0.30648779579902,0.45071417671979,0.340296549480063,3.94657198515496,0.85422955527427,0.635795703478686,3.30100205692843,0.721367704669072,3.60696756063881,1.30281799432113,2.19409231913646,0.876933046450788,1.7670364197088,1.10459878370759,1.61646056818812,1.77504796258307,0.503760491138201,1.01736355386293,0.773043412653187,0.272746120590835,0.573609190778008,0.121973706129595,0,0.348581828608555,0.207322110030741,0.504641701751257,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0.721879481669586,0.236613600079688,0.674338760312407,0,0.330881918197182,0.653638332277218,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,1.40241773803446,1.2347220339942,0,0,0,0,0.882926198829301,1.10689594688802,0.171567810298526,0.219500570817251,0,0.402115889646523,0.185176890317059,0.651616610620649,0,4.3299402607582,0.695582429850461,0.352226082707465,0.288732895522148,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.190493682876507,0,0,0,0.514137463516618,0.300343057843917,0.571652865261156,1.00917975910825,0,0.22001485746285,0.904902010304444,0,0,1.06375246633948,1.04007436911366,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0.871533458600294,1.99945982364114,0,0,0,0.718874566474748,0,0,0,0.821905290201534,0.537182889719687,0,0.197030760201927,0.215627574859517,0.128343036279748,0.76228387266739,2.60279707715243,0,1.17261385734044,1.91381625495949,0,0,0.414415513436035,0,0,0.542530047399471,1.87173775377726,1.07057393278297,1.26161932027148,0.819989904948992,0.300946099727719,0,0,1.99267679560631,0.553107505625109,0.434418072340414,0.195801157462741,0.686286847621712,0,0.215714200818617,0.213455115606889,0.606255142892519,3.32870879020994,1.81434175997808,1.24053903909388,3.06923946576125,1.12264037773229,1.02511319404561,1.02341449813341,1.93024705372329,0,0.154209693802656,0.355123450626254,0.246381468041427,0.519254429183621,0,0.241718899183244,1.20303882181971,0.736647911487171,0.229628896329213,0.182091168006717,0.131124414959424,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0.850468526382578,0.647747748306418,0,0,0.501689773854853,0.509752546090077,0,0.671624264166535,0.219259876645935,0.261435451024901,0,0.328014645699706,0.650756789328606,0.206082023295445,1.28197250745681,1.65018999841176,0.574265537996172,0.650060246036521,0,0,0.462145851343933,0.307007349452259,0.137836572484531,0.107420244868274,0.580066775656914,0.340906509664404,0.534192213880424,0.661139661443912,0.192190067365106,1.14851441245126,0.30347334256665,0,3.77774816196768,0,0,0,2.60979897622522,0.55597265731176,0.715624433709956,0,0.949138274156178,1.33441135746677,0.767693373934002,0,0,0,0.359744915166629,0.54907405947211,0.353437207037059,0.202182481573316,0,0,0.975267478179181,0.243713489631284,2.11300293513511,0.272999822815972,0.141405431953713,1.13008116620243,0.551365343546124,1.32687795048244,0.438450885253763,0,0.655894752046633,0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| ||
|short_description=p2@CCDC84 | |short_description=p2@CCDC84 | ||
}} | }} |
Latest revision as of 02:10, 16 September 2015
Short description: | p2@CCDC84 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC84_5end |
Coexpression cluster: | NA |
Association with transcript: | -81bp_to_ENST00000334418, NM_198489, uc001pul.2, uc010ryk.1, uc010ryl.1, uc010rym.1_5end |
EntrezGene: | CCDC84 |
HGNC: | 30460 |
UniProt: | Q86UT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.09e-07 | 7 |
macroglial cell | 2.09e-07 | 7 |
astrocyte | 2.09e-07 | 7 |
oligodendrocyte precursor cell | 2.09e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.14e-08 | 89 |
central nervous system | 2.65e-08 | 81 |
brain | 2.84e-08 | 68 |
future brain | 2.84e-08 | 68 |
ectoderm-derived structure | 3.47e-08 | 171 |
ectoderm | 3.47e-08 | 171 |
presumptive ectoderm | 3.47e-08 | 171 |
neurectoderm | 3.77e-07 | 86 |