FFCP PHASE1:Hg19::chr20:36694406..36694420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58490 | |EntrezGene=58490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=16209 | |HGNC=16209 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-50bp_to_uc002xhp.3_5end | |association_with_transcript=-50bp_to_uc002xhp.3_5end | ||
|cluster_id=chr20:36694406..36694420,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_9_at_RPRD1B_5end | |description=CAGE_peak_9_at_RPRD1B_5end | ||
|id=chr20:36694406..36694420,+ | |id=chr20:36694406..36694420,+ | ||
|ontology_enrichment_celltype=CL:0000810!3.10e-10!1;CL:0000895!3.10e-10!1;CL:0002436!3.10e-10!1;CL:0002427!3.10e-10!1;CL:0002428!3.10e-10!1;CL:0002429!3.10e-10!1;CL:0002433!3.10e-10!1;CL:0002431!3.10e-10!1;CL:0002432!3.10e-10!1;CL:0000181!2.40e-07!12;CL:0000417!2.40e-07!12;CL:0000668!2.40e-07!12;CL:0000414!2.40e-07!12;CL:0000412!2.40e-07!12;CL:0000182!2.40e-07!12 | |ontology_enrichment_celltype=CL:0000810!3.10e-10!1;CL:0000895!3.10e-10!1;CL:0002436!3.10e-10!1;CL:0002427!3.10e-10!1;CL:0002428!3.10e-10!1;CL:0002429!3.10e-10!1;CL:0002433!3.10e-10!1;CL:0002431!3.10e-10!1;CL:0002432!3.10e-10!1;CL:0000181!2.40e-07!12;CL:0000417!2.40e-07!12;CL:0000668!2.40e-07!12;CL:0000414!2.40e-07!12;CL:0000412!2.40e-07!12;CL:0000182!2.40e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.66e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.66e-25,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.10e-13;11!UBERON:0009847;3.24e-12;3!UBERON:0003353;3.24e-12;3!UBERON:0009497;3.56e-11;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.21e-43;19!UBERON:0006925;1.21e-43;19!UBERON:0002423;2.39e-33;25!UBERON:0002365;6.15e-27;31!UBERON:0002330;6.15e-27;31!UBERON:0002368;2.91e-23;33!UBERON:0000949;7.93e-17;43!UBERON:0002530;2.43e-13;57!UBERON:0005172;4.32e-12;52!UBERON:0005173;4.32e-12;52!UBERON:0002417;2.61e-09;58!UBERON:0000916;2.61e-09;58!UBERON:0001007;1.22e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.21e-43,19;UBERON:0006925,1.21e-43,19;UBERON:0008836,1.21e-43,19;UBERON:0008835,8.52e-38,22;UBERON:0003894,8.52e-38,22;UBERON:0009854,3.48e-36,23;UBERON:0007499,2.39e-33,25;UBERON:0009497,2.39e-33,25;UBERON:0000015,2.39e-33,25;UBERON:0002423,2.39e-33,25;UBERON:0006235,2.39e-33,25;UBERON:0004161,2.39e-33,25;UBERON:0009856,4.31e-32,26;UBERON:0002365,5.02e-27,31;UBERON:0002330,5.02e-27,31;UBERON:0002368,5.19e-24,35;UBERON:0003929,2.29e-22,54;UBERON:0002530,1.61e-20,59;UBERON:0000949,8.25e-19,45;UBERON:0005172,9.10e-16,54;UBERON:0005173,9.10e-16,54;UBERON:0005911,6.57e-15,82;UBERON:0002417,3.05e-14,60;UBERON:0000916,3.05e-14,60;UBERON:0004921,2.09e-10,118;UBERON:0005256,3.69e-10,122;UBERON:0001041,5.77e-10,87;UBERON:0005177,1.22e-08,101;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0000490,1.95e-08,148;UBERON:0003104,7.94e-08,160;UBERON:0009142,7.94e-08,160;UBERON:0009569,7.95e-08,112;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160;UBERON:0003914,1.66e-07,117 | |||
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|short_description=p9@RPRD1B | |short_description=p9@RPRD1B | ||
}} | }} |
Latest revision as of 02:38, 16 September 2015
Short description: | p9@RPRD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RPRD1B_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -50bp_to_uc002xhp.3_5end |
EntrezGene: | RPRD1B |
HGNC: | 16209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.66e-25 | 12 |