FFCP PHASE1:Hg19::chr10:104679225..104679235,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54805 | |EntrezGene=54805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=103 | |HGNC=103 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H8M5 | |UniProt=Q9H8M5 | ||
|association_with_transcript=264bp_to_AK023066_5end | |association_with_transcript=264bp_to_AK023066_5end | ||
|cluster_id=chr10:104679225..104679235,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_8_at_CNNM2_5end | |description=CAGE_peak_8_at_CNNM2_5end | ||
|id=chr10:104679225..104679235,+ | |id=chr10:104679225..104679235,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.17e-10;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!2.82e-16!3;UBERON:0005290!2.82e-16!3;UBERON:0010096!2.82e-16!3;UBERON:0007023!7.61e-13!115;UBERON:0000341!3.34e-11!2;UBERON:0001954!4.75e-11!2;UBERON:0003022!4.75e-11!2;UBERON:0002421!4.75e-11!2;UBERON:0002600!4.75e-11!2;UBERON:0002298!2.73e-10!8;UBERON:0004733!3.48e-10!12;UBERON:0002028!3.48e-10!12;UBERON:0007277!3.48e-10!12;UBERON:0004732!2.22e-09!13;UBERON:0000349!2.51e-09!5;UBERON:0001049!3.57e-08!57;UBERON:0005068!3.57e-08!57;UBERON:0006241!3.57e-08!57;UBERON:0007135!3.57e-08!57;UBERON:0003076!4.31e-08!15;UBERON:0003057!4.31e-08!15;UBERON:0002616!7.82e-08!59;UBERON:0000025!2.13e-07!194 | |ontology_enrichment_uberon=UBERON:0001896!2.82e-16!3;UBERON:0005290!2.82e-16!3;UBERON:0010096!2.82e-16!3;UBERON:0007023!7.61e-13!115;UBERON:0000341!3.34e-11!2;UBERON:0001954!4.75e-11!2;UBERON:0003022!4.75e-11!2;UBERON:0002421!4.75e-11!2;UBERON:0002600!4.75e-11!2;UBERON:0002298!2.73e-10!8;UBERON:0004733!3.48e-10!12;UBERON:0002028!3.48e-10!12;UBERON:0007277!3.48e-10!12;UBERON:0004732!2.22e-09!13;UBERON:0000349!2.51e-09!5;UBERON:0001049!3.57e-08!57;UBERON:0005068!3.57e-08!57;UBERON:0006241!3.57e-08!57;UBERON:0007135!3.57e-08!57;UBERON:0003076!4.31e-08!15;UBERON:0003057!4.31e-08!15;UBERON:0002616!7.82e-08!59;UBERON:0000025!2.13e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;7.04e-34;2!UBERON:0001896;2.93e-23;3!UBERON:0005290;2.93e-23;3!UBERON:0002298;2.31e-12;6!UBERON:0003126;9.89e-11;7!UBERON:0001005;9.89e-11;7!UBERON:0004733;7.70e-07;12!UBERON:0002028;7.70e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.05e-34,2;UBERON:0001896,3.27e-23,3;UBERON:0005290,3.27e-23,3;UBERON:0010096,3.27e-23,3;UBERON:0002298,2.45e-12,6;UBERON:0003126,9.89e-11,7;UBERON:0001005,9.89e-11,7;UBERON:0005178,6.80e-09,34;UBERON:0002224,6.80e-09,34;UBERON:0005181,1.14e-08,35;UBERON:0008947,4.52e-08,38;UBERON:0003258,4.52e-08,38;UBERON:0004733,7.92e-07,12;UBERON:0002028,7.92e-07,12;UBERON:0007277,7.92e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0,0.0674035438541849,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,2.98688179689365,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0,0,0,0,0,1.43444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0,0.0674035438541849,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,2.98688179689365,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0,0,0,0,0,1.43444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@CNNM2 | |short_description=p8@CNNM2 | ||
}} | }} |
Latest revision as of 02:46, 16 September 2015
Short description: | p8@CNNM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CNNM2_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 264bp_to_AK023066_5end |
EntrezGene: | CNNM2 |
HGNC: | 103 |
UniProt: | Q9H8M5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.05e-34 | 2 |
medulla oblongata | 3.27e-23 | 3 |
myelencephalon | 3.27e-23 | 3 |
future myelencephalon | 3.27e-23 | 3 |
brainstem | 2.45e-12 | 6 |
trachea | 9.89e-11 | 7 |
respiratory airway | 9.89e-11 | 7 |
thoracic cavity element | 6.80e-09 | 34 |
thoracic cavity | 6.80e-09 | 34 |
thoracic segment organ | 1.14e-08 | 35 |
respiratory primordium | 4.52e-08 | 38 |
endoderm of foregut | 4.52e-08 | 38 |
segmental subdivision of hindbrain | 7.92e-07 | 12 |
hindbrain | 7.92e-07 | 12 |
presumptive hindbrain | 7.92e-07 | 12 |