FFCP PHASE1:Hg19::chr11:118958689..118958710,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:118958689..118958710,+
|short_description=p2@HMBS
|description=CAGE_peak_2_at_HMBS_5end
|association_with_transcript=0bp_to_ENST00000392841,ENST0000053525...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3145 | |EntrezGene=3145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4982 | |HGNC=4982 | ||
|UniProt=F5GY90, | |TSSclassifier=strong | ||
|UniProt=F5GY90,P08397 | |||
|association_with_transcript=0bp_to_ENST00000392841,ENST00000535253,ENST00000542345,ENST00000543543,ENST00000546226,NM_001024382,uc001pvf.1_5end | |||
|cluster_id=chr11:118958689..118958710,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_HMBS_5end | |||
|id=chr11:118958689..118958710,+ | |||
|ontology_enrichment_celltype=CL:0000764!8.32e-07!2;CL:0000765!8.32e-07!2;CL:0000050!8.32e-07!2;CL:0000038!8.32e-07!2;CL:0000558!8.32e-07!2;CL:0000547!8.32e-07!2;CL:0000549!8.32e-07!2;CL:0000550!8.32e-07!2;CL:0000552!8.32e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;6.22e-11;2!CL:0000558;6.22e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,6.22e-11,2;CL:0000765,6.22e-11,2;CL:0000050,6.22e-11,2;CL:0000038,6.22e-11,2;CL:0000558,6.22e-11,2;CL:0000547,6.22e-11,2;CL:0000549,6.22e-11,2;CL:0000550,6.22e-11,2;CL:0000552,6.22e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.39e-20!8;DOID:8692!1.07e-11!31;DOID:1240!4.49e-10!39;DOID:2531!6.68e-07!51;DOID:0060083!6.68e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.92e-28;8!DOID:8692;4.05e-19;31!DOID:1240;4.17e-13;39!DOID:2531;3.74e-09;51!DOID:0060083;3.74e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.80e-28,8;DOID:8692,2.34e-19,31;DOID:1240,2.29e-17,39;DOID:2531,1.32e-12,51;DOID:0060083,1.32e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.34e-15!15;UBERON:0000179!1.34e-15!15;UBERON:0000463!1.34e-15!15;UBERON:0007023!3.33e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.91e-23;15!UBERON:0000179;3.91e-23;15!UBERON:0000463;3.91e-23;15!UBERON:0002390;6.23e-14;32!UBERON:0000341;8.52e-10;2!UBERON:0000922;3.46e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.82e-23,15;UBERON:0000179,3.82e-23,15;UBERON:0000463,3.82e-23,15;UBERON:0000341,8.72e-10,2 | |||
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| ||
|short_description=p2@HMBS | |||
}} | }} |
Latest revision as of 02:51, 16 September 2015
Short description: | p2@HMBS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HMBS_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000392841, ENST00000535253, ENST00000542345, ENST00000543543, ENST00000546226, NM_001024382, uc001pvf.1_5end |
EntrezGene: | HMBS |
HGNC: | 4982 |
UniProt: | F5GY90P08397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 6.22e-11 | 2 |
erythroblast | 6.22e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 6.22e-11 | 2 |
erythroid progenitor cell | 6.22e-11 | 2 |
reticulocyte | 6.22e-11 | 2 |
proerythroblast | 6.22e-11 | 2 |
basophilic erythroblast | 6.22e-11 | 2 |
polychromatophilic erythroblast | 6.22e-11 | 2 |
orthochromatic erythroblast | 6.22e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.82e-23 | 15 |
haemolymphatic fluid | 3.82e-23 | 15 |
organism substance | 3.82e-23 | 15 |
throat | 8.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.80e-28 | 8 |
myeloid leukemia | 2.34e-19 | 31 |
leukemia | 2.29e-17 | 39 |
hematologic cancer | 1.32e-12 | 51 |
immune system cancer | 1.32e-12 | 51 |