FFCP PHASE1:Hg19::chr11:118958689..118958710,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3145 | |EntrezGene=3145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4982 | |HGNC=4982 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY90,P08397 | |UniProt=F5GY90,P08397 | ||
|association_with_transcript=0bp_to_ENST00000392841,ENST00000535253,ENST00000542345,ENST00000543543,ENST00000546226,NM_001024382,uc001pvf.1_5end | |association_with_transcript=0bp_to_ENST00000392841,ENST00000535253,ENST00000542345,ENST00000543543,ENST00000546226,NM_001024382,uc001pvf.1_5end | ||
|cluster_id=chr11:118958689..118958710,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_HMBS_5end | |description=CAGE_peak_2_at_HMBS_5end | ||
|id=chr11:118958689..118958710,+ | |id=chr11:118958689..118958710,+ | ||
|ontology_enrichment_celltype=CL:0000764!8.32e-07!2;CL:0000765!8.32e-07!2;CL:0000050!8.32e-07!2;CL:0000038!8.32e-07!2;CL:0000558!8.32e-07!2;CL:0000547!8.32e-07!2;CL:0000549!8.32e-07!2;CL:0000550!8.32e-07!2;CL:0000552!8.32e-07!2 | |ontology_enrichment_celltype=CL:0000764!8.32e-07!2;CL:0000765!8.32e-07!2;CL:0000050!8.32e-07!2;CL:0000038!8.32e-07!2;CL:0000558!8.32e-07!2;CL:0000547!8.32e-07!2;CL:0000549!8.32e-07!2;CL:0000550!8.32e-07!2;CL:0000552!8.32e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;6.22e-11;2!CL:0000558;6.22e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,6.22e-11,2;CL:0000765,6.22e-11,2;CL:0000050,6.22e-11,2;CL:0000038,6.22e-11,2;CL:0000558,6.22e-11,2;CL:0000547,6.22e-11,2;CL:0000549,6.22e-11,2;CL:0000550,6.22e-11,2;CL:0000552,6.22e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.39e-20!8;DOID:8692!1.07e-11!31;DOID:1240!4.49e-10!39;DOID:2531!6.68e-07!51;DOID:0060083!6.68e-07!51 | |ontology_enrichment_disease=DOID:1036!1.39e-20!8;DOID:8692!1.07e-11!31;DOID:1240!4.49e-10!39;DOID:2531!6.68e-07!51;DOID:0060083!6.68e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.92e-28;8!DOID:8692;4.05e-19;31!DOID:1240;4.17e-13;39!DOID:2531;3.74e-09;51!DOID:0060083;3.74e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.80e-28,8;DOID:8692,2.34e-19,31;DOID:1240,2.29e-17,39;DOID:2531,1.32e-12,51;DOID:0060083,1.32e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.34e-15!15;UBERON:0000179!1.34e-15!15;UBERON:0000463!1.34e-15!15;UBERON:0007023!3.33e-08!115 | |ontology_enrichment_uberon=UBERON:0000178!1.34e-15!15;UBERON:0000179!1.34e-15!15;UBERON:0000463!1.34e-15!15;UBERON:0007023!3.33e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.91e-23;15!UBERON:0000179;3.91e-23;15!UBERON:0000463;3.91e-23;15!UBERON:0002390;6.23e-14;32!UBERON:0000341;8.52e-10;2!UBERON:0000922;3.46e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.82e-23,15;UBERON:0000179,3.82e-23,15;UBERON:0000463,3.82e-23,15;UBERON:0000341,8.72e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,9.2184429671277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,1583.27556926029,1915.79898511047,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,25.8798280708406,24.468390628556,14.2411796793541,5.24109906007136,7.81588318863769,14.9148861574325,21.6012574895246,27.7593811702995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.5336766931244,70.159817400196,29.7501246323581,1.33228787199128,7.04935025439248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,67.4819428514635,90.0126685862551,101.168267707954,85.4211877707039,163.757471340972,64.210377908073,0,0,0,0,0,0,1.22206028986725,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,1.53036380815245,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0.669514372325618,4.97157696401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,2.25554728980492,0,0,0,0,0,0,0,0,0,0,48.680864804358,0,0,0,153.707991138177,0,0,0,0,1.06787412567695,15.2488175946676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,2.30626162422861,0.115233987555779,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,1.65772931330429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0.356760272332706,0,0.329821550236287,0,0,0,0,0,0,0,0,1.6906229103336,0,0.281951753939561,49.4392000757337,0,0,0,0,1.46067277649303,0,0,0,0,2.61810414204226,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,14.4999107692667,1.42838658878244,0.129177819672012,1.92431614317159,0,0.12729431655633,0.202117188958219,0,0.342233301085281,0,0.143444410785353,0.99798106963804,0,0,0,0,0,0,1.62758471326295,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,9.2184429671277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,1583.27556926029,1915.79898511047,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,25.8798280708406,24.468390628556,14.2411796793541,5.24109906007136,7.81588318863769,14.9148861574325,21.6012574895246,27.7593811702995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.5336766931244,70.159817400196,29.7501246323581,1.33228787199128,7.04935025439248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,67.4819428514635,90.0126685862551,101.168267707954,85.4211877707039,163.757471340972,64.210377908073,0,0,0,0,0,0,1.22206028986725,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,1.53036380815245,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0.669514372325618,4.97157696401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,2.25554728980492,0,0,0,0,0,0,0,0,0,0,48.680864804358,0,0,0,153.707991138177,0,0,0,0,1.06787412567695,15.2488175946676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,2.30626162422861,0.115233987555779,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,1.65772931330429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0.356760272332706,0,0.329821550236287,0,0,0,0,0,0,0,0,1.6906229103336,0,0.281951753939561,49.4392000757337,0,0,0,0,1.46067277649303,0,0,0,0,2.61810414204226,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,14.4999107692667,1.42838658878244,0.129177819672012,1.92431614317159,0,0.12729431655633,0.202117188958219,0,0.342233301085281,0,0.143444410785353,0.99798106963804,0,0,0,0,0,0,1.62758471326295,0,0.201273793591026,0 | ||
|short_description=p2@HMBS | |short_description=p2@HMBS | ||
}} | }} |
Latest revision as of 02:51, 16 September 2015
Short description: | p2@HMBS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HMBS_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000392841, ENST00000535253, ENST00000542345, ENST00000543543, ENST00000546226, NM_001024382, uc001pvf.1_5end |
EntrezGene: | HMBS |
HGNC: | 4982 |
UniProt: | F5GY90P08397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 6.22e-11 | 2 |
erythroblast | 6.22e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 6.22e-11 | 2 |
erythroid progenitor cell | 6.22e-11 | 2 |
reticulocyte | 6.22e-11 | 2 |
proerythroblast | 6.22e-11 | 2 |
basophilic erythroblast | 6.22e-11 | 2 |
polychromatophilic erythroblast | 6.22e-11 | 2 |
orthochromatic erythroblast | 6.22e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.82e-23 | 15 |
haemolymphatic fluid | 3.82e-23 | 15 |
organism substance | 3.82e-23 | 15 |
throat | 8.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.80e-28 | 8 |
myeloid leukemia | 2.34e-19 | 31 |
leukemia | 2.29e-17 | 39 |
hematologic cancer | 1.32e-12 | 51 |
immune system cancer | 1.32e-12 | 51 |