FFCP PHASE1:Hg19::chr20:36888649..36888662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=671 | |EntrezGene=671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1095 | |HGNC=1095 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_ENST00000479646_5end | |association_with_transcript=41bp_to_ENST00000479646_5end | ||
|cluster_id=chr20:36888649..36888662,+ | |||
|description=CAGE_peak_4_at_BPI_5end | |description=CAGE_peak_4_at_BPI_5end | ||
|id=chr20:36888649..36888662,+ | |id=chr20:36888649..36888662,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.48e-08!180;CL:0000183!1.13e-07!59 | |ontology_enrichment_celltype=CL:0000055!8.48e-08!180;CL:0000183!1.13e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.82e-12;2!CL:0002549;9.19e-12;2!CL:0002600;2.34e-11;2!CL:0002590;4.02e-08;3!CL:0000064;7.44e-08;3!CL:0000067;7.44e-08;3!CL:0005012;7.44e-08;3!CL:0002304;7.44e-08;3!CL:0000192;1.42e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.83e-12,2;CL:0002549,6.49e-12,2;CL:0002600,9.48e-12,2;CL:0000192,1.21e-08,43;CL:0000514,1.21e-08,43;CL:0002590,2.86e-08,3;CL:0000064,4.89e-08,3;CL:0000067,4.89e-08,3;CL:0005012,4.89e-08,3;CL:0002304,4.89e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.55e-08;3!UBERON:0003057;4.55e-08;3!CL:0000514;1.42e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.20e-13!82;UBERON:0005743!1.66e-12!86;UBERON:0002616!7.20e-12!59;UBERON:0003075!1.23e-11!86;UBERON:0007284!1.23e-11!86;UBERON:0000073!3.62e-11!94;UBERON:0001016!3.62e-11!94;UBERON:0002346!1.15e-10!90;UBERON:0002200!1.23e-10!11;UBERON:0006876!1.23e-10!11;UBERON:0000955!2.11e-10!69;UBERON:0006238!2.11e-10!69;UBERON:0001049!4.68e-10!57;UBERON:0005068!4.68e-10!57;UBERON:0006241!4.68e-10!57;UBERON:0007135!4.68e-10!57;UBERON:0007023!7.07e-10!115;UBERON:0005284!1.31e-08!5;UBERON:0003076!1.38e-08!15;UBERON:0003057!1.38e-08!15;UBERON:0000033!1.94e-08!123;UBERON:0000119!7.54e-08!312;UBERON:0000153!1.45e-07!129;UBERON:0007811!1.45e-07!129;UBERON:0004121!1.65e-07!169;UBERON:0000477!2.69e-07!286;UBERON:0005174!4.50e-07!5;UBERON:0001137!4.50e-07!5;UBERON:0000924!4.63e-07!173;UBERON:0006601!4.63e-07!173;UBERON:0004573!6.15e-07!33;UBERON:0004571!6.15e-07!33;UBERON:0000483!9.65e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;1.88e-17;5!UBERON:0006876;7.16e-17;11!UBERON:0005629;9.19e-12;2!UBERON:0005358;9.19e-12;2!UBERON:0001886;9.19e-12;2!UBERON:0004086;9.19e-12;2!UBERON:0005282;9.19e-12;2!UBERON:0005281;9.19e-12;2!UBERON:0002240;4.55e-08;3!UBERON:0005174;4.55e-08;3!UBERON:0001137;4.55e-08;3!UBERON:0001778;7.44e-08;3!UBERON:0001775;7.44e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,9.54e-18,5;UBERON:0006876,3.25e-17,11;UBERON:0005629,6.49e-12,2;UBERON:0005358,6.49e-12,2;UBERON:0001886,6.49e-12,2;UBERON:0004086,6.49e-12,2;UBERON:0005282,6.49e-12,2;UBERON:0005281,6.49e-12,2;UBERON:0001778,4.89e-08,3;UBERON:0001775,4.89e-08,3;UBERON:0002240,5.84e-08,3;UBERON:0005174,5.84e-08,3;UBERON:0001137,5.84e-08,3;UBERON:0000989,9.48e-07,1;UBERON:0008811,9.48e-07,1;UBERON:0006258,9.48e-07,1;UBERON:0005876,9.48e-07,1;UBERON:0004874,9.48e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0.369363174230364,1.42800483870977,0,0.572471974262113,0.136874425072884,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,1.5905718941022,0.973269740605272,0.472674085820339,1.99556457716308,1.40535657109002,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0,0,1.66493170409425,3.45705554687999,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,3.39456719319505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,1.52631302506568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,4.79556075716608,0.7333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,1.50051156317903,0,6.23912584592421,0.713715955188647,1.10391690523754,0.585707074963566,0.300946099727719,9.09630016223939,2.0694614258501,0,0,0,5.48243240895674,15.4414540714885,0,0,0,0,0,0,0.744323423456331,0,0,0.128139149255701,0,0.160853921143607,0,0,0.532685175939381,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0.214840489736547,0.145016693914229,0,0.356128142586949,0,0,0,0,1.39453664789186,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,6.86999456361558,0.744316738719335,3.79655309662471,1.90630193923825,0,1.28381696410176,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,0,2.65375590096488,2.19225442626881,1.73632660280006,1.9676842561399,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,1.31631238292384,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0.789168805698781,0,0,0.884612114798832,0,0,0,0,0,0,0,0.554698692052555,0,0,0,0.52418000472609,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0,0.226624183040251,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,1.14681839138014,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0.466311601748341,0.147855149989634,0,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54012762853469,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0.205116364240755,1.00828678488687,0,0,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,1.98484471355718,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,1.17785080268967,0.297046400327086,2.5359343655004,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0.872701380680755,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0.803892390468535,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.122241444182866,1.62758471326295,0,0,0 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|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0.369363174230364,1.42800483870977,0,0.572471974262113,0.136874425072884,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,1.5905718941022,0.973269740605272,0.472674085820339,1.99556457716308,1.40535657109002,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0,0,1.66493170409425,3.45705554687999,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,3.39456719319505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,1.52631302506568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,4.79556075716608,0.7333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,1.50051156317903,0,6.23912584592421,0.713715955188647,1.10391690523754,0.585707074963566,0.300946099727719,9.09630016223939,2.0694614258501,0,0,0,5.48243240895674,15.4414540714885,0,0,0,0,0,0,0.744323423456331,0,0,0.128139149255701,0,0.160853921143607,0,0,0.532685175939381,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0.214840489736547,0.145016693914229,0,0.356128142586949,0,0,0,0,1.39453664789186,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,6.86999456361558,0.744316738719335,3.79655309662471,1.90630193923825,0,1.28381696410176,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,0,2.65375590096488,2.19225442626881,1.73632660280006,1.9676842561399,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,1.31631238292384,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0.789168805698781,0,0,0.884612114798832,0,0,0,0,0,0,0,0.554698692052555,0,0,0,0.52418000472609,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0,0.226624183040251,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,1.14681839138014,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0.466311601748341,0.147855149989634,0,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54012762853469,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0.205116364240755,1.00828678488687,0,0,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,1.98484471355718,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,1.17785080268967,0.297046400327086,2.5359343655004,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0.872701380680755,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0.803892390468535,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.122241444182866,1.62758471326295,0,0,0 | ||
|short_description=p4@BPI | |short_description=p4@BPI | ||
}} | }} |
Latest revision as of 03:22, 16 September 2015
Short description: | p4@BPI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BPI_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000479646_5end |
EntrezGene: | BPI |
HGNC: | 1095 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.83e-12 | 2 |
fibroblast of choroid plexus | 6.49e-12 | 2 |
smooth muscle cell of trachea | 9.48e-12 | 2 |
smooth muscle cell | 1.21e-08 | 43 |
smooth muscle myoblast | 1.21e-08 | 43 |
smooth muscle cell of the brain vasculature | 2.86e-08 | 3 |
ciliated cell | 4.89e-08 | 3 |
ciliated epithelial cell | 4.89e-08 | 3 |
multi-ciliated epithelial cell | 4.89e-08 | 3 |
non-pigmented ciliary epithelial cell | 4.89e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 9.54e-18 | 5 |
vasculature of organ | 3.25e-17 | 11 |
vascular plexus | 6.49e-12 | 2 |
ventricle of nervous system | 6.49e-12 | 2 |
choroid plexus | 6.49e-12 | 2 |
brain ventricle | 6.49e-12 | 2 |
ventricular system of brain | 6.49e-12 | 2 |
ventricular system of central nervous system | 6.49e-12 | 2 |
ciliary epithelium | 4.89e-08 | 3 |
ciliary body | 4.89e-08 | 3 |
spinal cord | 5.84e-08 | 3 |
dorsal region element | 5.84e-08 | 3 |
dorsum | 5.84e-08 | 3 |
penis | 9.48e-07 | 1 |
intromittent organ | 9.48e-07 | 1 |
lateral plate mesenchyme | 9.48e-07 | 1 |
undifferentiated genital tubercle | 9.48e-07 | 1 |
somatopleure | 9.48e-07 | 1 |