FFCP PHASE2:Hg19::chr5:150019857..150019868,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:11346 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30672 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=11346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30672 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8N3V7 | ||
|association_with_transcript=-338bp_to_NM_001109974,NM_007286_5end | |association_with_transcript=-338bp_to_NM_001109974,NM_007286_5end | ||
|cluster_id=chr5:150019857..150019868,+ | |cluster_id=chr5:150019857..150019868,+ |
Latest revision as of 05:26, 16 September 2015
Short description: | p18@SYNPO |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SYNPO_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -338bp_to_NM_001109974, NM_007286_5end |
EntrezGene: | SYNPO |
HGNC: | 30672 |
UniProt: | Q8N3V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p18@SYNPO |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endothelial cell | 1.13e-77 | 36 |
endothelial cell of vascular tree | 2.22e-73 | 24 |
meso-epithelial cell | 3.66e-65 | 45 |
blood vessel endothelial cell | 3.20e-61 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.20e-61 | 18 |
lining cell | 9.48e-49 | 58 |
barrier cell | 9.48e-49 | 58 |
mesodermal cell | 1.38e-39 | 121 |
endothelial cell of artery | 2.67e-32 | 9 |
aortic endothelial cell | 8.18e-22 | 6 |
Showing 1 to 10 of 30 entries
Ontology term | p-value | n |
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blood vessel endothelium | 3.20e-61 | 18 |
endothelium | 3.20e-61 | 18 |
cardiovascular system endothelium | 3.20e-61 | 18 |
vasculature | 8.62e-56 | 78 |
vascular system | 8.62e-56 | 78 |
vessel | 9.85e-52 | 68 |
simple squamous epithelium | 3.28e-49 | 22 |
squamous epithelium | 7.18e-48 | 25 |
epithelial tube open at both ends | 2.20e-43 | 59 |
blood vessel | 2.20e-43 | 59 |
Showing 1 to 10 of 69 entries