FFCP PHASE1:Hg19::chr1:114414230..114414251,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26191 | |EntrezGene=26191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9652 | |HGNC=9652 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000484147_5end | |association_with_transcript=34bp_to_ENST00000484147_5end | ||
|cluster_id=chr1:114414230..114414251,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_PTPN22_5end | |description=CAGE_peak_3_at_PTPN22_5end | ||
|id=chr1:114414230..114414251,- | |id=chr1:114414230..114414251,- | ||
|ontology_enrichment_celltype=CL:0000738!3.88e-43!140;CL:0000037!4.75e-40!172;CL:0000566!4.75e-40!172;CL:0002032!5.17e-38!165;CL:0000837!5.17e-38!165;CL:0000988!1.21e-36!182;CL:0002031!2.01e-32!124;CL:0002087!1.96e-28!119;CL:0000763!1.13e-21!112;CL:0000049!1.13e-21!112;CL:0000791!1.85e-21!18;CL:0000789!1.85e-21!18;CL:0002420!1.85e-21!18;CL:0002419!1.85e-21!18;CL:0000790!1.85e-21!18;CL:0000766!1.12e-20!76;CL:0000557!5.81e-17!71;CL:0000084!3.64e-16!25;CL:0000827!3.64e-16!25;CL:0000838!1.42e-15!52;CL:0000542!3.89e-15!53;CL:0000051!3.89e-15!53;CL:0000839!1.75e-14!70;CL:0002057!8.47e-14!42;CL:0000625!6.98e-13!11;CL:0002009!1.24e-12!65;CL:0000860!1.81e-12!45;CL:0000624!4.05e-12!6;CL:0000134!3.05e-11!358;CL:0002194!1.03e-10!63;CL:0000576!1.03e-10!63;CL:0000040!1.03e-10!63;CL:0000559!1.03e-10!63;CL:0002320!1.21e-10!365;CL:0002274!2.41e-09!5;CL:0000457!2.41e-09!5;CL:0002191!2.41e-09!5;CL:0000097!2.41e-09!5;CL:0000831!2.41e-09!5;CL:0002028!2.41e-09!5;CL:0000219!1.42e-08!390;CL:0000094!1.73e-08!8;CL:0000623!4.10e-07!3;CL:0000825!4.10e-07!3;CL:0000898!5.67e-07!3 | |ontology_enrichment_celltype=CL:0000738!3.88e-43!140;CL:0000037!4.75e-40!172;CL:0000566!4.75e-40!172;CL:0002032!5.17e-38!165;CL:0000837!5.17e-38!165;CL:0000988!1.21e-36!182;CL:0002031!2.01e-32!124;CL:0002087!1.96e-28!119;CL:0000763!1.13e-21!112;CL:0000049!1.13e-21!112;CL:0000791!1.85e-21!18;CL:0000789!1.85e-21!18;CL:0002420!1.85e-21!18;CL:0002419!1.85e-21!18;CL:0000790!1.85e-21!18;CL:0000766!1.12e-20!76;CL:0000557!5.81e-17!71;CL:0000084!3.64e-16!25;CL:0000827!3.64e-16!25;CL:0000838!1.42e-15!52;CL:0000542!3.89e-15!53;CL:0000051!3.89e-15!53;CL:0000839!1.75e-14!70;CL:0002057!8.47e-14!42;CL:0000625!6.98e-13!11;CL:0002009!1.24e-12!65;CL:0000860!1.81e-12!45;CL:0000624!4.05e-12!6;CL:0000134!3.05e-11!358;CL:0002194!1.03e-10!63;CL:0000576!1.03e-10!63;CL:0000040!1.03e-10!63;CL:0000559!1.03e-10!63;CL:0002320!1.21e-10!365;CL:0002274!2.41e-09!5;CL:0000457!2.41e-09!5;CL:0002191!2.41e-09!5;CL:0000097!2.41e-09!5;CL:0000831!2.41e-09!5;CL:0002028!2.41e-09!5;CL:0000219!1.42e-08!390;CL:0000094!1.73e-08!8;CL:0000623!4.10e-07!3;CL:0000825!4.10e-07!3;CL:0000898!5.67e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000624;5.21e-39;6!CL:0000791;9.54e-29;18!CL:0000789;9.54e-29;18!CL:0002419;9.54e-29;18!CL:0000623;1.88e-21;3!CL:0000898;1.44e-20;3!CL:0000084;2.61e-20;25!CL:0001014;3.21e-15;2!CL:0001016;3.21e-15;2!CL:0000815;2.06e-14;2!CL:0000792;2.06e-14;2!CL:0002677;2.06e-14;2!CL:0000094;1.12e-13;8!CL:0000097;9.76e-13;5!CL:0000081;5.49e-10;11!CL:0000775;6.56e-10;3!CL:0000226;1.07e-09;3!CL:0000842;1.07e-09;3!CL:0000542;2.25e-09;53!CL:0000895;6.85e-08;1!CL:0000163;2.76e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.35e-39,6;CL:0000791,6.45e-29,18;CL:0000789,6.45e-29,18;CL:0002420,6.45e-29,18;CL:0002419,6.45e-29,18;CL:0000790,6.45e-29,18;CL:0000738,4.27e-26,136;CL:0000623,2.09e-21,3;CL:0000825,2.09e-21,3;CL:0000898,6.66e-21,3;CL:0000084,1.97e-20,25;CL:0000827,1.97e-20,25;CL:0000037,2.80e-20,168;CL:0000988,5.10e-19,177;CL:0002032,1.23e-17,161;CL:0000837,1.23e-17,161;CL:0000838,1.62e-16,52;CL:0002031,2.43e-16,120;CL:0000542,3.66e-16,53;CL:0000051,3.66e-16,53;CL:0001014,3.22e-15,2;CL:0001016,3.22e-15,2;CL:0000815,1.68e-14,2;CL:0000792,1.68e-14,2;CL:0002677,1.68e-14,2;CL:0000094,1.05e-13,8;CL:0000097,1.85e-12,5;CL:0002028,1.85e-12,5;CL:0002087,1.29e-11,115;CL:0000081,5.24e-10,11;CL:0000775,6.87e-10,3;CL:0000226,1.17e-09,3;CL:0000842,1.17e-09,3;CL:0000810,3.83e-08,1;CL:0000895,3.83e-08,1;CL:0002436,3.83e-08,1;CL:0002427,3.83e-08,1;CL:0002428,3.83e-08,1;CL:0002429,3.83e-08,1;CL:0002433,3.83e-08,1;CL:0002431,3.83e-08,1;CL:0002432,3.83e-08,1;CL:0000134,3.64e-07,354;CL:0000163,3.90e-07,9;CL:0002320,6.21e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;9.54e-29;18!CL:0000051;2.25e-09;53!CL:0002427;6.85e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.04e-19!102;UBERON:0003061!4.04e-19!102;UBERON:0002193!2.48e-16!112;UBERON:0002371!5.04e-14!80;UBERON:0001474!2.01e-12!86;UBERON:0002405!2.03e-12!115;UBERON:0002384!7.78e-10!375;UBERON:0004765!2.61e-09!101;UBERON:0001434!2.61e-09!101;UBERON:0004177!2.95e-08!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@PTPN22 | |short_description=p3@PTPN22 | ||
}} | }} |
Latest revision as of 06:14, 16 September 2015
Short description: | p3@PTPN22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPN22_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 34bp_to_ENST00000484147_5end |
EntrezGene: | PTPN22 |
HGNC: | 9652 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data