FFCP PHASE1:Hg19::chr10:111767934..111767949,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:111767934..111767949,+ to FFCP PHASE1:Hg19::chr10:111767934..111767949,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=120 | |EntrezGene=120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=245 | |HGNC=245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000484622,ENST00000487085_5end | |||
|cluster_id=chr10:111767934..111767949,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_9_at_ADD3_5end | |||
|id=chr10:111767934..111767949,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.58e-24!140;CL:0002087!4.24e-19!119;CL:0000037!9.41e-19!172;CL:0000566!9.41e-19!172;CL:0002031!7.02e-17!124;CL:0002032!4.49e-16!165;CL:0000837!4.49e-16!165;CL:0000988!1.19e-15!182;CL:0000542!5.59e-13!53;CL:0000051!5.59e-13!53;CL:0000838!9.14e-13!52;CL:0000766!1.16e-08!76;CL:0000084!1.61e-08!25;CL:0000827!1.61e-08!25;CL:0000860!1.63e-08!45;CL:0002057!2.28e-08!42;CL:0000791!1.49e-07!18;CL:0000789!1.49e-07!18;CL:0002420!1.49e-07!18;CL:0002419!1.49e-07!18;CL:0000790!1.49e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.52e-10;33!CL:0002057;4.52e-10;33!CL:0000084;1.84e-08;25!CL:0000542;4.61e-08;53!CL:0000473;9.34e-08;39!CL:0000234;9.34e-08;39!CL:0002087;1.30e-07;104!CL:0000791;1.86e-07;18!CL:0000789;1.86e-07;18!CL:0002419;1.86e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.66e-27,136;CL:0002087,6.52e-22,115;CL:0000037,1.44e-20,168;CL:0002031,1.34e-18,120;CL:0000988,1.46e-17,177;CL:0002032,1.57e-17,161;CL:0000837,1.57e-17,161;CL:0000542,4.57e-14,53;CL:0000051,4.57e-14,53;CL:0000838,8.02e-14,52;CL:0000766,4.57e-10,72;CL:0000860,1.60e-09,42;CL:0002057,1.60e-09,42;CL:0000084,4.13e-09,25;CL:0000827,4.13e-09,25;CL:0000473,2.38e-08,48;CL:0000234,2.38e-08,48;CL:0000791,6.44e-08,18;CL:0000789,6.44e-08,18;CL:0002420,6.44e-08,18;CL:0002419,6.44e-08,18;CL:0000790,6.44e-08,18;CL:0002009,6.44e-08,61;CL:0002194,1.20e-07,59;CL:0000576,1.20e-07,59;CL:0000040,1.20e-07,59;CL:0000559,1.20e-07,59;CL:0000557,1.49e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000051;4.61e-08;53!CL:0000790;1.86e-07;18!CL:0002057;1.87e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-08!102;UBERON:0003061!1.51e-08!102;UBERON:0002193!6.65e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.41e-10,98;UBERON:0003061,3.41e-10,98;UBERON:0002193,1.94e-08,108 | |||
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| ||
|short_description=p9@ADD3 | |||
}} | }} |
Latest revision as of 07:51, 16 September 2015
Short description: | p9@ADD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ADD3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -16bp_to_ENST00000484622, ENST00000487085_5end |
EntrezGene: | ADD3 |
HGNC: | 245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.66e-27 | 136 |
nongranular leukocyte | 6.52e-22 | 115 |
hematopoietic stem cell | 1.44e-20 | 168 |
hematopoietic lineage restricted progenitor cell | 1.34e-18 | 120 |
hematopoietic cell | 1.46e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.57e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-17 | 161 |
lymphocyte | 4.57e-14 | 53 |
common lymphoid progenitor | 4.57e-14 | 53 |
lymphoid lineage restricted progenitor cell | 8.02e-14 | 52 |
myeloid leukocyte | 4.57e-10 | 72 |
classical monocyte | 1.60e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.60e-09 | 42 |
T cell | 4.13e-09 | 25 |
pro-T cell | 4.13e-09 | 25 |
defensive cell | 2.38e-08 | 48 |
phagocyte | 2.38e-08 | 48 |
mature alpha-beta T cell | 6.44e-08 | 18 |
alpha-beta T cell | 6.44e-08 | 18 |
immature T cell | 6.44e-08 | 18 |
mature T cell | 6.44e-08 | 18 |
immature alpha-beta T cell | 6.44e-08 | 18 |
macrophage dendritic cell progenitor | 6.44e-08 | 61 |
monopoietic cell | 1.20e-07 | 59 |
monocyte | 1.20e-07 | 59 |
monoblast | 1.20e-07 | 59 |
promonocyte | 1.20e-07 | 59 |
granulocyte monocyte progenitor cell | 1.49e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.41e-10 | 98 |
blood island | 3.41e-10 | 98 |
hemolymphoid system | 1.94e-08 | 108 |