FFCP PHASE1:Hg19::chr20:43538744..43538755,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:43538744..43538755,+ to FFCP PHASE1:Hg19::chr20:43538744..43538755,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80336 | |EntrezGene=80336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15797 | |HGNC=15797 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VY17 | |UniProt=Q4VY17 | ||
|association_with_transcript=-9bp_to_ENST00000537323_5end | |||
|cluster_id=chr20:43538744..43538755,+ | |||
|coexpression_cluster_id=C4040 | |||
|description=CAGE_peak_3_at_PABPC1L_5end | |||
|id=chr20:43538744..43538755,+ | |||
|ontology_enrichment_celltype=CL:0000223!6.00e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.43e-12;7!CL:0000586;4.43e-12;7!CL:0002322;7.65e-11;5!CL:0000083;1.85e-09;4!CL:0002178;1.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.46e-12,7;CL:0000586,2.46e-12,7;CL:0002322,3.10e-11,5;CL:0000223,2.93e-10,58;CL:0000083,7.12e-10,4;CL:0000066,7.10e-09,253;CL:0002178,2.31e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.38e-08;10!UBERON:0005564;3.38e-08;10!UBERON:0009497;9.34e-08;13 | |||
|ontology_enrichment_disease=DOID:162!2.85e-24!235;DOID:14566!1.06e-23!239;DOID:0050687!6.91e-22!143;DOID:305!2.55e-17!106;DOID:0050686!1.09e-08!137;DOID:7!6.66e-08!39;DOID:3095!7.74e-08!22;DOID:2994!7.74e-08!22;DOID:3119!8.83e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3095;8.41e-11;22!DOID:2994;8.41e-11;22!DOID:1793;1.85e-09;4!DOID:305;8.77e-08;106!DOID:0050687;2.38e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.89e-21,106;DOID:0050687,7.75e-21,143;DOID:162,5.16e-12,235;DOID:14566,1.68e-11,239;DOID:3095,5.06e-11,22;DOID:2994,5.06e-11,22;DOID:1793,7.12e-10,4;DOID:7,1.02e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.02e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;2.26e-10;10!UBERON:0000945;7.49e-08;5!UBERON:0010039;7.49e-08;5!UBERON:0000922;2.36e-07;49!UBERON:0002075;8.47e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,6.39e-11,10;UBERON:0002075,4.38e-07,18;UBERON:0000949,8.29e-07,45;UBERON:0002323,8.95e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0.246242116153576,0,0,0.85870796139317,0.547497700291537,0.251085279189606,0.382067028739756,0.410502947249729,0.314843125254717,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,1.31694240986513,0.710846162437108,0.587200878669695,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0.501559486172034,0,0,1.94826728407911,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0.328875809207352,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.472674085820339,0.665188192387692,0.702678285545008,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,1.72131935057184,1.14734648299525,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0.234321431833797,0.624320153660641,0,0,0.23486899728753,0.647491777472526,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0.505008341862199,0.500474079487857,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0.717558542755448,0,0.211931901159562,1.20036438433761,0.103052529238439,1.54584324027377,0,0.843881661206331,0.0974370051611986,0.757301322732344,0.276149695926898,0,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0.286804595389004,1.95157929807353,1.98794652482228,1.16193942869518,1.14027160516907,1.7662459561294,2.55484151353081,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,1.59884970106048,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.811512834825538,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.352193736052904,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0,0,0.112131084345361,0.87192013766656,0.1466765716419,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.410952645100767,0.179060963239896,0.560425719967636,0.197030760201927,0,0.128343036279748,1.27047312111232,0,0,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.892144943985809,0.630809660135739,0.117141414992713,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0.426910231213777,0,0,0,0,0.767309866440312,0,0.128139149255701,0,0,0,0,0.177561725313127,0.246381468041427,0,0.116210378459959,1.0877350463246,0.40101294060657,0.736647911487171,0.229628896329213,0.182091168006717,0.262248829918848,0,0.308061348417659,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0.650756789328606,0,0.366277859273374,0.907604499126468,0,0,0,0.386682873168488,0,0.15350367472613,0.413509717453592,0.537101224341368,0.290033387828457,0.426133137080504,0.712256285173899,0.330569830721956,0.768760269460425,1.02090169995667,0.6069466851333,0,1.88887408098384,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,1.74967360122491,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0.648473311192717,0,0,0.534120355637366,1.92495971052672,0,0.371606350251437,0.721346064882224,0.497992903438899,0.159426272728822,1.1974762285969,0,0.211673582723883,0.324621940274555,0.842391534340376,0.684704037099577,0.313359791546046,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0.66614393599564,0,0.18714054040822,0,1.09224469574562,0.222886768554957,0.568272293612826,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.445234820091624,0,2.32237948940793,0,0.276283915531148,2.01546198283421,0.20453736500431,0.246169610922139,0.622079175323615,1.16828856491525,1.79021174675609,0,0.0986434056369336,0,1.11136990144637,0,0,0,1.04171104434093,0.174919999992391,0,0.341380344856499,0,0,0.689486746482929,0.291604613383254,4.5142498682656,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.227884111694002,1.61394733071642,0.628303510868405,1.62971057883012,0.31900115973192,0,1.06606955203727,0,0.941881538370149,0.332423363800313,0.676786981851542,0.19606253431774,0.671286347903371,0.189753732724185,0,0,0.326465616318295,0.848118428603645,0.649165919226273,0.995261931078505,0.0884575645033392,0.611030144933625,2.37216902944498,1.35920332841153,1.77517314159274,0.067401132980677,0,0,0.547364367646998,1.9566461893209,1.45668227720456,0.394584402849391,1.20990716048664,0.30607276163049,0.126373159256976,2.70582154946087,1.55532287095871,1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| ||
|short_description=p3@PABPC1L | |||
}} | }} |
Latest revision as of 08:53, 16 September 2015
Short description: | p3@PABPC1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PABPC1L_5end |
Coexpression cluster: | C4040_testicular_granulocyte_hepatoblastoma_somatostatinoma_smallcell_tubular_extraskeletal |
Association with transcript: | -9bp_to_ENST00000537323_5end |
EntrezGene: | PABPC1L |
HGNC: | 15797 |
UniProt: | Q4VY17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.46e-12 | 7 |
germ cell | 2.46e-12 | 7 |
embryonic stem cell | 3.10e-11 | 5 |
endodermal cell | 2.93e-10 | 58 |
epithelial cell of pancreas | 7.12e-10 | 4 |
epithelial cell | 7.10e-09 | 253 |
epithelial cell of stomach | 2.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas | 6.39e-11 | 10 |
viscus | 4.38e-07 | 18 |
endocrine system | 8.29e-07 | 45 |
body cavity | 8.95e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.89e-21 | 106 |
cell type cancer | 7.75e-21 | 143 |
cancer | 5.16e-12 | 235 |
disease of cellular proliferation | 1.68e-11 | 239 |
germ cell and embryonal cancer | 5.06e-11 | 22 |
germ cell cancer | 5.06e-11 | 22 |
pancreatic cancer | 7.12e-10 | 4 |
disease of anatomical entity | 1.02e-07 | 39 |