FFCP PHASE1:Hg19::chr12:111127551..111127618,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:111127551..111127618,-
|short_description=p2@HVCN1
|description=CAGE_peak_2_at_HVCN1_5end
|association_with_transcript=0bp_to_ENST00000439744,ENST00000549...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84329 | |EntrezGene=84329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28240 | |HGNC=28240 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCH5,F8VPF7,Q96D96 | |UniProt=F8WCH5,F8VPF7,Q96D96 | ||
|association_with_transcript=0bp_to_ENST00000439744,ENST00000549442,NM_001040107,uc001trt.1,uc010syd.1_5end | |||
|cluster_id=chr12:111127551..111127618,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_HVCN1_5end | |||
|id=chr12:111127551..111127618,- | |||
|ontology_enrichment_celltype=CL:0000542!1.24e-09!53;CL:0000051!1.24e-09!53;CL:0000838!2.29e-09!52;CL:0000236!2.27e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.02e-08;13!CL:0000945;3.28e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.48e-10,53;CL:0000051,1.48e-10,53;CL:0000838,2.85e-10,52;CL:0000236,5.33e-09,14;CL:0000945,4.39e-07,24;CL:0000826,4.39e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.82e-17!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.87e-17,114;UBERON:0000479,1.63e-07,773 | |||
|phase1_expression=1.09007027562334,0.214100523890983,3.10099689011137,3.00219895059391,3.5756887554183,3.48935409640147,0,3.79031924056099,1.82829939739887,1.22866968250754,0.697801167972428,1.74753097704138,3.4289707169699,1.36142988256051,1.32558950291166,4.03395087871065,1.80808358407193,2.19093027116212,1.95173119516203,2.33930010345897,2.44800829493104,0.626909442956176,1.14494394852423,1.77936752594749,2.38531015230125,10.2393963702255,11.4119819335425,10.7833770399741,1.57345710739562,1.15148819429164,1.23852898652861,0.919421224478927,3.614471025339,1.47901604066715,0,0.142169232487422,0,1.10799081706375,2.00544447470142,2.38711957787437,4.03047853631864,6.47787332037959,4.37878464978117,1.45398238779565,1.13362783106643,1.94067248950253,0.697287110717054,0.822335776043652,0.619412741790207,0.575384784644301,1.0246428261164,0.47296445977717,1.72372840368309,1.29096936716765,0,0.564727018627814,0.818718450173537,0.224723484445085,0.918251677112708,0.320929027076094,0,0.989553900560148,1.19678194572979,0.852449501065388,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0.434377689410233,1.21079900526674,1.47311054395026,0.632924774881769,2.74631872205524,4.67729459923096,2.30624510059213,3.03287304095537,2.25265339262259,1.6072558669708,1.14005097496499,3.9783335439818,3.28795476776341,28.1593991138116,46.4217819572812,45.3649719470413,36.2720689181531,50.4498943665376,39.0831659169049,45.6120962221555,23.8513438633841,30.7375003319102,18.2043528704991,23.318666915639,0,1.68152568894461,0.526768169550154,1.96709770113833,1.57204305099666,1.43921049299656,6.35308682484577,14.340579731878,11.3627473376336,13.6378709885538,4.90206010294764,3.82987679717288,4.87374568083967,4.06205795647523,1.5370958367081,2.34106825607781,8.05745732558013,5.80335037350282,10.4329110864619,5.19002971067211,4.81573490561484,13.589618094647,6.45863253376127,4.98186641682498,2.40539211837841,3.79529538029254,4.77848121486145,2.60433381542567,3.8018081777935,4.36667845325541,4.99147783502232,4.99722906209383,4.73554504088034,3.28451198768419,3.02410114837099,1.60464117470104,2.60683926989038,17.0664806419773,1.34140171940727,1.53435074212236,0,2.00535164254356,1.73815822752988,3.1811437882044,1.94653948121054,1.03988298880475,0,0.790513071238134,3.6019245761871,3.27865759463288,0.370784442784429,0.324547393654683,0.696518949197069,1.32957960518865,4.76981248610684,5.14795419702115,4.08603251462521,0.596287222100115,0,1.73570250803797,2.26123176769604,1.67799774483962,0.825354125820202,0.626984899610432,1.03366703667732,0,0,1.61131726843659,0,0.24406205754817,1.10298924103761,3.24056779152704,1.96459402224975,0.898117490504679,1.12611480483322,1.53316637465883,0,1.46561395144326,1.31780417436063,0,0.436094052142534,0.496971951695318,0.759783069987479,1.05927344650575,0.573673241497627,1.41867352879343,0,0,0,1.8672662123986,0.942974704487816,1.79808093424805,2.8757911252537,0.576175924479999,1.40592859100278,0.312160076830321,0,1.19558944441441,0.469737994575059,0.485618833104395,0.421352420106746,1.42907919878425,0.61417158655884,2.16984140469107,2.37600571456411,2.22540236350701,4.55080680969013,5.03032699271367,0.673344455816265,1.12606667884768,0.554128230968366,2.19488810440419,1.22595118319608,1.35214253015937,0.907457465280168,2.51145489964407,2.34913127700424,0.635795703478686,1.20036438433761,1.95799805553034,3.86460810068444,1.67505170698431,1.68776332241266,0.389748020644795,1.51460264546469,2.02509777013059,1.77810662500693,5.32514388774922,2.41805035746337,1.86516651541536,2.12586938479627,2.18196896472668,1.14721838155602,1.21973706129595,1.59035721985782,1.39432731443422,1.14027160516907,1.7662459561294,0.36497735907583,0,0.643240938192885,2.76269842704961,3.71494342425583,2.88751792667834,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,8.231480226628,2.94017422771084,0,0.982827216677626,1.18157981336281,0,0,1.02940686179115,0.98775256867763,0,1.10581869652794,1.29623823221941,0.977424915930974,0,2.88662684050547,1.85488647960123,1.17408694235822,0.433099343283221,0.462985512576611,0.570762456703795,0,0,6.15542515218493,2.80805118167085,5.49935300468294,0.93733833986777,3.69560682037491,1.13420077793909,0,0,0,0,0,6.01251535068239,6.48539790376326,5.17593977048158,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0.285826432630578,1.90622843387113,1.74384027533312,0.80672114403045,1.03417372606222,17.8828222925941,1.690605505112,3.45719551560332,4.16029747645464,2.82928111688356,0,2.66422179016099,2.28764789853036,3.7983512377401,4.93944202068461,3.58309802723109,2.84313558994037,2.37585561880029,2.1100756394171,0.871533458600294,0.99972991182057,4.86495122564762,2.00902836572851,4.21667878966063,2.87549826589899,3.44585807502342,1.42636905040718,0.868687840005475,2.05476322550383,3.04403637507822,7.28553435957927,3.94061520403854,3.23441362289276,4.2353201972317,1.77866236955724,2.60279707715243,0,1.67516265334349,0,0.749007023947182,0,0.414415513436035,1.8403723757871,1.000341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| ||
|short_description=p2@HVCN1 | |||
}} | }} |
Latest revision as of 09:05, 16 September 2015
Short description: | p2@HVCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HVCN1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000439744, ENST00000549442, NM_001040107, uc001trt.1, uc010syd.1_5end |
EntrezGene: | HVCN1 |
HGNC: | 28240 |
UniProt: | F8WCH5F8VPF7Q96D96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.48e-10 | 53 |
common lymphoid progenitor | 1.48e-10 | 53 |
lymphoid lineage restricted progenitor cell | 2.85e-10 | 52 |
B cell | 5.33e-09 | 14 |
lymphocyte of B lineage | 4.39e-07 | 24 |
pro-B cell | 4.39e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.87e-17 | 114 |
tissue | 1.63e-07 | 773 |