FFCP PHASE1:Hg19::chr16:30759563..30759568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5261 | |EntrezGene=5261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8931 | |HGNC=8931 | ||
|TSSclassifier=strong | |||
|UniProt=P15735 | |UniProt=P15735 | ||
|association_with_transcript=-22bp_to_ENST00000328273_5end | |association_with_transcript=-22bp_to_ENST00000328273_5end | ||
|cluster_id=chr16:30759563..30759568,+ | |||
|description=CAGE_peak_5_at_PHKG2_5end | |description=CAGE_peak_5_at_PHKG2_5end | ||
|id=chr16:30759563..30759568,+ | |id=chr16:30759563..30759568,+ | ||
|ontology_enrichment_celltype=CL:0000084!7.17e-20!25;CL:0000827!7.17e-20!25;CL:0000791!4.94e-19!18;CL:0000789!4.94e-19!18;CL:0002420!4.94e-19!18;CL:0002419!4.94e-19!18;CL:0000790!4.94e-19!18;CL:0000542!5.40e-15!53;CL:0000051!5.40e-15!53;CL:0000838!2.33e-14!52;CL:0000625!5.88e-14!11;CL:0000624!3.55e-08!6 | |ontology_enrichment_celltype=CL:0000084!7.17e-20!25;CL:0000827!7.17e-20!25;CL:0000791!4.94e-19!18;CL:0000789!4.94e-19!18;CL:0002420!4.94e-19!18;CL:0002419!4.94e-19!18;CL:0000790!4.94e-19!18;CL:0000542!5.40e-15!53;CL:0000051!5.40e-15!53;CL:0000838!2.33e-14!52;CL:0000625!5.88e-14!11;CL:0000624!3.55e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.93e-27;25!CL:0000791;1.07e-21;18!CL:0000789;1.07e-21;18!CL:0002419;1.07e-21;18!CL:0000625;2.53e-16;11!CL:0002032;2.07e-12;1!CL:0000557;2.07e-12;1!CL:0000542;2.95e-12;53!CL:0000624;2.61e-08;6!CL:0000047;7.82e-07;2!CL:0000815;7.82e-07;2!CL:0000792;7.82e-07;2!CL:0002677;7.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.47e-27,25;CL:0000827,1.47e-27,25;CL:0000791,9.32e-22,18;CL:0000789,9.32e-22,18;CL:0002420,9.32e-22,18;CL:0002419,9.32e-22,18;CL:0000790,9.32e-22,18;CL:0000625,1.70e-16,11;CL:0000838,2.80e-16,52;CL:0000542,5.95e-16,53;CL:0000051,5.95e-16,53;CL:0000624,3.25e-08,6;CL:0000815,7.20e-07,2;CL:0000792,7.20e-07,2;CL:0002677,7.20e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.07e-21;18!CL:0000051;2.95e-12;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;7.82e-07;2!DOID:962;7.82e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.71e-08!34;UBERON:0003528!7.71e-08!34;UBERON:0001869!9.81e-07!32 | |ontology_enrichment_uberon=UBERON:0002020!7.71e-08!34;UBERON:0003528!7.71e-08!34;UBERON:0001869!9.81e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.87e-23;2!UBERON:0005058;4.87e-23;2!UBERON:0009113;4.87e-23;2!UBERON:0004177;8.48e-10;5!UBERON:0005057;8.48e-10;5!UBERON:0003714;7.82e-07;2!UBERON:0001875;7.82e-07;2!UBERON:0006514;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.76e-12,4;UBERON:0005058,2.76e-12,4;UBERON:0009113,2.76e-12,4;UBERON:0003295,2.76e-12,4;UBERON:0005562,2.76e-12,4;UBERON:0003351,1.74e-08,6;UBERON:0004177,2.15e-07,7;UBERON:0005057,2.15e-07,7;UBERON:0001875,9.54e-07,2;UBERON:0006514,9.54e-07,2 | |||
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| ||
|short_description=p5@PHKG2 | |short_description=p5@PHKG2 | ||
}} | }} |
Latest revision as of 09:28, 16 September 2015
Short description: | p5@PHKG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHKG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000328273_5end |
EntrezGene: | PHKG2 |
HGNC: | 8931 |
UniProt: | P15735 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.47e-27 | 25 |
pro-T cell | 1.47e-27 | 25 |
mature alpha-beta T cell | 9.32e-22 | 18 |
alpha-beta T cell | 9.32e-22 | 18 |
immature T cell | 9.32e-22 | 18 |
mature T cell | 9.32e-22 | 18 |
immature alpha-beta T cell | 9.32e-22 | 18 |
CD8-positive, alpha-beta T cell | 1.70e-16 | 11 |
lymphoid lineage restricted progenitor cell | 2.80e-16 | 52 |
lymphocyte | 5.95e-16 | 53 |
common lymphoid progenitor | 5.95e-16 | 53 |
CD4-positive, alpha-beta T cell | 3.25e-08 | 6 |
regulatory T cell | 7.20e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.20e-07 | 2 |
naive regulatory T cell | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.76e-12 | 4 |
hemolymphoid system gland | 2.76e-12 | 4 |
thymic region | 2.76e-12 | 4 |
pharyngeal gland | 2.76e-12 | 4 |
thymus primordium | 2.76e-12 | 4 |
pharyngeal epithelium | 1.74e-08 | 6 |
hemopoietic organ | 2.15e-07 | 7 |
immune organ | 2.15e-07 | 7 |
globus pallidus | 9.54e-07 | 2 |
pallidum | 9.54e-07 | 2 |