FFCP PHASE1:Hg19::chr16:30759563..30759568,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5261 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8931 | |||
|TSSclassifier=strong | |||
|UniProt=P15735 | |||
|association_with_transcript=-22bp_to_ENST00000328273_5end | |||
|cluster_id=chr16:30759563..30759568,+ | |||
|description=CAGE_peak_5_at_PHKG2_5end | |||
|id=chr16:30759563..30759568,+ | |||
|ontology_enrichment_celltype=CL:0000084!7.17e-20!25;CL:0000827!7.17e-20!25;CL:0000791!4.94e-19!18;CL:0000789!4.94e-19!18;CL:0002420!4.94e-19!18;CL:0002419!4.94e-19!18;CL:0000790!4.94e-19!18;CL:0000542!5.40e-15!53;CL:0000051!5.40e-15!53;CL:0000838!2.33e-14!52;CL:0000625!5.88e-14!11;CL:0000624!3.55e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.93e-27;25!CL:0000791;1.07e-21;18!CL:0000789;1.07e-21;18!CL:0002419;1.07e-21;18!CL:0000625;2.53e-16;11!CL:0002032;2.07e-12;1!CL:0000557;2.07e-12;1!CL:0000542;2.95e-12;53!CL:0000624;2.61e-08;6!CL:0000047;7.82e-07;2!CL:0000815;7.82e-07;2!CL:0000792;7.82e-07;2!CL:0002677;7.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.47e-27,25;CL:0000827,1.47e-27,25;CL:0000791,9.32e-22,18;CL:0000789,9.32e-22,18;CL:0002420,9.32e-22,18;CL:0002419,9.32e-22,18;CL:0000790,9.32e-22,18;CL:0000625,1.70e-16,11;CL:0000838,2.80e-16,52;CL:0000542,5.95e-16,53;CL:0000051,5.95e-16,53;CL:0000624,3.25e-08,6;CL:0000815,7.20e-07,2;CL:0000792,7.20e-07,2;CL:0002677,7.20e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.07e-21;18!CL:0000051;2.95e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;7.82e-07;2!DOID:962;7.82e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.71e-08!34;UBERON:0003528!7.71e-08!34;UBERON:0001869!9.81e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.87e-23;2!UBERON:0005058;4.87e-23;2!UBERON:0009113;4.87e-23;2!UBERON:0004177;8.48e-10;5!UBERON:0005057;8.48e-10;5!UBERON:0003714;7.82e-07;2!UBERON:0001875;7.82e-07;2!UBERON:0006514;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.76e-12,4;UBERON:0005058,2.76e-12,4;UBERON:0009113,2.76e-12,4;UBERON:0003295,2.76e-12,4;UBERON:0005562,2.76e-12,4;UBERON:0003351,1.74e-08,6;UBERON:0004177,2.15e-07,7;UBERON:0005057,2.15e-07,7;UBERON:0001875,9.54e-07,2;UBERON:0006514,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66852776159066,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,1.02800749499755,0.501559486172034,1.30368906653436,0.473447805734733,0,0.557052284425868,0.883817722424512,0.664601683750863,0.812411591295047,0.384273959177026,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0.741432815810302,0.535081656179426,1.04535523804977,0.226618685395132,0.383220493601921,0,0.759059076058509,0.637130828648193,1.30216690771284,1.90090408889675,0.451725357233318,0.511946444617674,1.24930726552346,0.236777252044017,1.64225599384209,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.385029108839245,0,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.640365346820666,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0.144269212976445,1.56512055366511,0.478278818186467,0.399158742865633,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0.111308705022906,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,2.04386596391473,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0.0821154570532092,0.193978032976839,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0.343189995723929,0.14405479798815,0,0,0,0,0.101998217636322,0,1.20084057741958,0,1.27746588066972,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,1.32506888912221,0.129282956361551,0.26446520348538,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,1.11728983594649,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0.504143392443436,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,1.05522746615772,0,0,0,0,0.227662191351298,0,0.345701962667338,0,0.271878931907327,0.0657727735628491,0.118193840883968,0,0,0.628462359664008,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0.303114792872958,0.267964130156178,0,0.20686599172379,0.426467963801962,0,1.42095601639213,1.92431614317159,0,0.0636471582781649,0,0,0,0.202056159043763,0,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p5@PHKG2 | |||
}} |
Latest revision as of 09:28, 16 September 2015
Short description: | p5@PHKG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHKG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000328273_5end |
EntrezGene: | PHKG2 |
HGNC: | 8931 |
UniProt: | P15735 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.47e-27 | 25 |
pro-T cell | 1.47e-27 | 25 |
mature alpha-beta T cell | 9.32e-22 | 18 |
alpha-beta T cell | 9.32e-22 | 18 |
immature T cell | 9.32e-22 | 18 |
mature T cell | 9.32e-22 | 18 |
immature alpha-beta T cell | 9.32e-22 | 18 |
CD8-positive, alpha-beta T cell | 1.70e-16 | 11 |
lymphoid lineage restricted progenitor cell | 2.80e-16 | 52 |
lymphocyte | 5.95e-16 | 53 |
common lymphoid progenitor | 5.95e-16 | 53 |
CD4-positive, alpha-beta T cell | 3.25e-08 | 6 |
regulatory T cell | 7.20e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.20e-07 | 2 |
naive regulatory T cell | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.76e-12 | 4 |
hemolymphoid system gland | 2.76e-12 | 4 |
thymic region | 2.76e-12 | 4 |
pharyngeal gland | 2.76e-12 | 4 |
thymus primordium | 2.76e-12 | 4 |
pharyngeal epithelium | 1.74e-08 | 6 |
hemopoietic organ | 2.15e-07 | 7 |
immune organ | 2.15e-07 | 7 |
globus pallidus | 9.54e-07 | 2 |
pallidum | 9.54e-07 | 2 |