FFCP PHASE1:Hg19::chr16:3117545..3117588,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9235 | |EntrezGene=9235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16830 | |HGNC=16830 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-216bp_to_ENST00000528652_5end | |association_with_transcript=-216bp_to_ENST00000528652_5end | ||
|cluster_id=chr16:3117545..3117588,+ | |||
|coexpression_cluster_id=C239 | |coexpression_cluster_id=C239 | ||
|description=CAGE_peak_8_at_IL32_5end | |description=CAGE_peak_8_at_IL32_5end | ||
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|ontology_enrichment_celltype=CL:0000791!2.05e-16!18;CL:0000789!2.05e-16!18;CL:0002420!2.05e-16!18;CL:0002419!2.05e-16!18;CL:0000790!2.05e-16!18;CL:0000084!1.53e-15!25;CL:0000827!1.53e-15!25;CL:0000625!5.80e-11!11;CL:0000838!2.14e-09!52;CL:0000542!4.48e-09!53;CL:0000051!4.48e-09!53 | |ontology_enrichment_celltype=CL:0000791!2.05e-16!18;CL:0000789!2.05e-16!18;CL:0002420!2.05e-16!18;CL:0002419!2.05e-16!18;CL:0000790!2.05e-16!18;CL:0000084!1.53e-15!25;CL:0000827!1.53e-15!25;CL:0000625!5.80e-11!11;CL:0000838!2.14e-09!52;CL:0000542!4.48e-09!53;CL:0000051!4.48e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.10e-27;25!CL:0000791;3.93e-27;18!CL:0000789;3.93e-27;18!CL:0002419;3.93e-27;18!CL:0000898;1.26e-16;3!CL:0000624;2.42e-14;6!CL:0000815;8.03e-12;2!CL:0000792;8.03e-12;2!CL:0002677;8.03e-12;2!CL:0000625;1.29e-11;11!CL:0000542;3.07e-09;53 | |ontology_enrichment_celltype_v019=CL:0000084;1.10e-27;25!CL:0000791;3.93e-27;18!CL:0000789;3.93e-27;18!CL:0002419;3.93e-27;18!CL:0000898;1.26e-16;3!CL:0000624;2.42e-14;6!CL:0000815;8.03e-12;2!CL:0000792;8.03e-12;2!CL:0002677;8.03e-12;2!CL:0000625;1.29e-11;11!CL:0000542;3.07e-09;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.32e-28,25;CL:0000827,7.32e-28,25;CL:0000791,1.77e-27,18;CL:0000789,1.77e-27,18;CL:0002420,1.77e-27,18;CL:0002419,1.77e-27,18;CL:0000790,1.77e-27,18;CL:0000898,1.17e-16,3;CL:0000624,2.19e-14,6;CL:0000838,3.73e-12,52;CL:0000815,4.68e-12,2;CL:0000792,4.68e-12,2;CL:0002677,4.68e-12,2;CL:0000625,6.53e-12,11;CL:0000542,7.00e-12,53;CL:0000051,7.00e-12,53;CL:0000893,4.65e-11,2;CL:0002489,4.65e-11,2;CL:0000809,4.65e-11,2;CL:0000808,4.65e-11,2;CL:0000894,4.65e-11,2;CL:0000806,4.65e-11,2;CL:0000807,4.65e-11,2;CL:0000805,4.65e-11,2;CL:0002425,4.65e-11,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.93e-27;18!CL:0002425;2.34e-11;2!CL:0000051;3.07e-09;53 | |ontology_enrichment_development_v019=CL:0000790;3.93e-27;18!CL:0002425;2.34e-11;2!CL:0000051;3.07e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;7.80e-07;1!DOID:0060061;7.80e-07;1!DOID:8691;7.80e-07;1 | |ontology_enrichment_disease_v019=DOID:0060060;7.80e-07;1!DOID:0060061;7.80e-07;1!DOID:8691;7.80e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.03e-07,1;DOID:0060061,8.03e-07,1;DOID:8691,8.03e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0006562!2.56e-08!11;UBERON:0001042!9.47e-08!10;UBERON:0009145!9.47e-08!10;UBERON:0003929!6.74e-07!54 | |ontology_enrichment_uberon=UBERON:0006562!2.56e-08!11;UBERON:0001042!9.47e-08!10;UBERON:0009145!9.47e-08!10;UBERON:0003929!6.74e-07!54 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@IL32 | |short_description=p8@IL32 | ||
}} | }} |
Latest revision as of 11:30, 16 September 2015
Short description: | p8@IL32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IL32_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | -216bp_to_ENST00000528652_5end |
EntrezGene: | IL32 |
HGNC: | 16830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.32e-28 | 25 |
pro-T cell | 7.32e-28 | 25 |
mature alpha-beta T cell | 1.77e-27 | 18 |
alpha-beta T cell | 1.77e-27 | 18 |
immature T cell | 1.77e-27 | 18 |
mature T cell | 1.77e-27 | 18 |
immature alpha-beta T cell | 1.77e-27 | 18 |
naive T cell | 1.17e-16 | 3 |
CD4-positive, alpha-beta T cell | 2.19e-14 | 6 |
lymphoid lineage restricted progenitor cell | 3.73e-12 | 52 |
regulatory T cell | 4.68e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.68e-12 | 2 |
naive regulatory T cell | 4.68e-12 | 2 |
CD8-positive, alpha-beta T cell | 6.53e-12 | 11 |
lymphocyte | 7.00e-12 | 53 |
common lymphoid progenitor | 7.00e-12 | 53 |
thymocyte | 4.65e-11 | 2 |
double negative thymocyte | 4.65e-11 | 2 |
double-positive, alpha-beta thymocyte | 4.65e-11 | 2 |
DN4 thymocyte | 4.65e-11 | 2 |
DN1 thymic pro-T cell | 4.65e-11 | 2 |
DN2 thymocyte | 4.65e-11 | 2 |
DN3 thymocyte | 4.65e-11 | 2 |
immature single positive thymocyte | 4.65e-11 | 2 |
early T lineage precursor | 4.65e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.03e-07 | 1 |
cutaneous T cell lymphoma | 8.03e-07 | 1 |
mycosis fungoides | 8.03e-07 | 1 |