FFCP PHASE1:Hg19::chr10:115312798..115312819,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4798 | |||
|TSSclassifier=strong | |||
|UniProt=F5H475 | |||
|association_with_transcript=-5bp_to_ENST00000537906_5end | |||
|cluster_id=chr10:115312798..115312819,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_HABP2_5end | |||
|id=chr10:115312798..115312819,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.31e-11!12;CL:0000417!1.31e-11!12;CL:0000668!1.31e-11!12;CL:0000414!1.31e-11!12;CL:0000412!1.31e-11!12;CL:0000182!1.31e-11!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.40e-13;12!CL:0000313;3.45e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.40e-13,12;CL:0000313,3.96e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.13e-14;11!UBERON:0003104;1.78e-13;31!UBERON:0009497;1.12e-11;13!UBERON:0006242;1.30e-10;1 | |||
|ontology_enrichment_disease=DOID:114!1.24e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;3.45e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.96e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005172!3.59e-19!55;UBERON:0005173!3.59e-19!55;UBERON:0002417!7.48e-17!61;UBERON:0000916!7.48e-17!61;UBERON:0002107!9.95e-16!19;UBERON:0006925!9.95e-16!19;UBERON:0008836!9.95e-16!19;UBERON:0009497!2.28e-14!25;UBERON:0000015!2.28e-14!25;UBERON:0002423!2.28e-14!25;UBERON:0006235!2.28e-14!25;UBERON:0004161!2.28e-14!25;UBERON:0005057!1.22e-13!26;UBERON:0008835!2.38e-13!22;UBERON:0003894!2.38e-13!22;UBERON:0009854!1.07e-12!23;UBERON:0005177!1.76e-12!107;UBERON:0007499!1.52e-11!25;UBERON:0009856!4.91e-11!26;UBERON:0009569!2.81e-10!113;UBERON:0003929!9.39e-10!54;UBERON:0004921!2.40e-09!129;UBERON:0004185!2.40e-09!129;UBERON:0002365!5.49e-09!31;UBERON:0002330!5.49e-09!31;UBERON:0001007!7.29e-08!155;UBERON:0001555!7.29e-08!155;UBERON:0007026!7.29e-08!155;UBERON:0002368!8.99e-08!35;UBERON:0000466!1.06e-07!126;UBERON:0004119!1.37e-07!169;UBERON:0000925!1.37e-07!169;UBERON:0006595!1.37e-07!169;UBERON:0005911!1.61e-07!82;UBERON:0005409!2.41e-07!35;UBERON:0000949!4.29e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.27e-17;25!UBERON:0002107;2.32e-17;19!UBERON:0006925;2.32e-17;19!UBERON:0002365;1.61e-10;31!UBERON:0002330;1.61e-10;31!UBERON:0004911;3.45e-10;1!UBERON:0005172;3.24e-09;52!UBERON:0005173;3.24e-09;52!UBERON:0002368;5.22e-09;33!UBERON:0002108;3.78e-08;4!UBERON:0000949;5.64e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.27e-17,25;UBERON:0000015,1.27e-17,25;UBERON:0002423,1.27e-17,25;UBERON:0006235,1.27e-17,25;UBERON:0004161,1.27e-17,25;UBERON:0002107,2.32e-17,19;UBERON:0006925,2.32e-17,19;UBERON:0008836,2.32e-17,19;UBERON:0008835,6.18e-15,22;UBERON:0003894,6.18e-15,22;UBERON:0009854,2.88e-14,23;UBERON:0007499,4.33e-13,25;UBERON:0005172,1.25e-12,54;UBERON:0005173,1.25e-12,54;UBERON:0009856,1.44e-12,26;UBERON:0002417,3.07e-11,60;UBERON:0000916,3.07e-11,60;UBERON:0002365,1.82e-10,31;UBERON:0002330,1.82e-10,31;UBERON:0004911,3.96e-10,1;UBERON:0003929,5.13e-10,54;UBERON:0000949,1.95e-09,45;UBERON:0002368,3.24e-09,35;UBERON:0002108,3.92e-08,4;UBERON:0005177,1.24e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,2.01856680700503,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,456.318125358591,181.823035085361,236.906752579243,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,91.7065003664728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.62712140552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,3.95788600015034,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,34.3659321530358,0,0.288180834308212,0,2.23073497220554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.0787831823072236,0,0.0674035438541849,16.7326718575073,0,0,0,0,0,0,0,0,0,0,28.2912489204121,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,212.50073883322,143.107440025199,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,7.03362610109783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,1.29556554731173,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339777236026,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.385870790539723,4.37119121007915,0,0,0,0,0,0,0,0,0.966868319603658,0,0,0,0,0,0,0,0,0,0,4.2322147241232,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@HABP2 | |||
}} |
Latest revision as of 11:50, 16 September 2015
Short description: | p1@HABP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HABP2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -5bp_to_ENST00000537906_5end |
EntrezGene: | HABP2 |
HGNC: | 4798 |
UniProt: | F5H475 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.40e-13 | 12 |
serous secreting cell | 3.96e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.27e-17 | 25 |
anatomical boundary | 1.27e-17 | 25 |
hepatobiliary system | 1.27e-17 | 25 |
foregut-midgut junction | 1.27e-17 | 25 |
septum transversum | 1.27e-17 | 25 |
liver | 2.32e-17 | 19 |
digestive gland | 2.32e-17 | 19 |
liver bud | 2.32e-17 | 19 |
hepatic diverticulum | 6.18e-15 | 22 |
liver primordium | 6.18e-15 | 22 |
digestive tract diverticulum | 2.88e-14 | 23 |
epithelial sac | 4.33e-13 | 25 |
abdomen element | 1.25e-12 | 54 |
abdominal segment element | 1.25e-12 | 54 |
sac | 1.44e-12 | 26 |
abdominal segment of trunk | 3.07e-11 | 60 |
abdomen | 3.07e-11 | 60 |
exocrine gland | 1.82e-10 | 31 |
exocrine system | 1.82e-10 | 31 |
epithelium of female gonad | 3.96e-10 | 1 |
gut epithelium | 5.13e-10 | 54 |
endocrine system | 1.95e-09 | 45 |
endocrine gland | 3.24e-09 | 35 |
small intestine | 3.92e-08 | 4 |
trunk region element | 1.24e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.96e-10 | 1 |