FFCP PHASE2:Hg19::chr19:1753535..1753546,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:390874 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:133...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=390874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=13399 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O60422 | ||
|association_with_transcript=-115bp_to_NM_001080488,uc010xgr.1_5end | |association_with_transcript=-115bp_to_NM_001080488,uc010xgr.1_5end | ||
|cluster_id=chr19:1753535..1753546,+ | |cluster_id=chr19:1753535..1753546,+ |
Latest revision as of 12:13, 16 September 2015
Short description: | p3@ONECUT3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ONECUT3_5end |
Coexpression cluster: | C3764_rhabdomyosarcoma_signet_gastric_gall_giant_endometrioid_adenocarcinoma |
Association with transcript: | -115bp_to_NM_001080488, uc010xgr.1_5end |
EntrezGene: | ONECUT3 |
HGNC: | 13399 |
UniProt: | O60422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@ONECUT3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell of stomach | 1.01e-38 | 3 |
endo-epithelial cell | 9.05e-07 | 42 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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stomach | 3.06e-15 | 8 |
food storage organ | 3.06e-15 | 8 |
gallbladder | 9.90e-11 | 3 |
gall bladder primordium | 9.90e-11 | 3 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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signet ring cell adenocarcinoma | 1.51e-57 | 2 |
adenocarcinoma | 1.14e-18 | 25 |
gastrointestinal system cancer | 3.88e-09 | 14 |
Showing 1 to 3 of 3 entries