FFCP PHASE1:Hg19::chr10:116164869..116164891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84632 | |EntrezGene=84632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25901 | |HGNC=25901 | ||
|TSSclassifier=strong | |||
|UniProt=F6QUH3,Q8N4X5 | |UniProt=F6QUH3,Q8N4X5 | ||
|association_with_transcript=-354bp_to_ENST00000369271,ENST00000541919,NM_001001936,NM_032550,uc001lbn.2,uc001lbo.2,uc001lbp.2,uc001lbr.1,uc010qse.1_5end | |association_with_transcript=-354bp_to_ENST00000369271,ENST00000541919,NM_001001936,NM_032550,uc001lbn.2,uc001lbo.2,uc001lbp.2,uc001lbr.1,uc010qse.1_5end | ||
|cluster_id=chr10:116164869..116164891,- | |||
|description=CAGE_peak_6_at_AFAP1L2_5end | |description=CAGE_peak_6_at_AFAP1L2_5end | ||
|id=chr10:116164869..116164891,- | |id=chr10:116164869..116164891,- | ||
|ontology_enrichment_celltype=CL:0002577;1.01e-07;3!CL:0002231;1.86e-07;3!CL:0002076;3.06e-07;42 | |ontology_enrichment_celltype=CL:0002076!2.07e-25!43;CL:0000223!5.11e-19!59;CL:0000066!9.88e-16!254;CL:0002368!7.82e-13!13;CL:0002251!3.47e-11!21;CL:0002159!7.64e-08!13;CL:0002202!4.47e-07!9;CL:0002632!4.47e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0002577;1.01e-07;3!CL:0002231;1.86e-07;3!CL:0002076;3.06e-07;42 | ||
|ontology_enrichment_disease=DOID:1749;1.31e-12;14!DOID:3493;9.01e-11;2 | |ontology_enrichment_celltype_v019_2=CL:0000066,5.09e-10,253;CL:0002076,5.77e-08,42;CL:0002577,7.14e-08,3;CL:0002231,3.92e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0000058;5.41e-08;10!UBERON:0006947;1.86e-07;3!UBERON:0004054;1.86e-07;3!UBERON:0003100;6.76e-07;41!UBERON:0002294;8.13e-07;7!UBERON:0001173;8.13e-07;7 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!1.24e-14!14;DOID:305!2.15e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.31e-12;14!DOID:3493;9.01e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.79e-12,14;DOID:3493,1.81e-10,2;DOID:305,2.42e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.47e-17!169;UBERON:0000925!8.47e-17!169;UBERON:0006595!8.47e-17!169;UBERON:0001007!5.28e-13!155;UBERON:0001555!5.28e-13!155;UBERON:0007026!5.28e-13!155;UBERON:0000974!2.87e-10!10;UBERON:0001004!5.31e-10!72;UBERON:0000077!2.06e-09!130;UBERON:0000161!2.22e-09!35;UBERON:0000344!6.47e-09!12;UBERON:0003729!7.11e-09!5;UBERON:0003100!1.15e-08!41;UBERON:0004175!3.37e-08!25;UBERON:0000064!3.87e-08!219;UBERON:0005156!5.66e-08!59;UBERON:0000990!5.66e-08!59;UBERON:0000062!6.13e-08!511;UBERON:0004921!8.50e-08!129;UBERON:0004185!8.50e-08!129;UBERON:0000065!1.24e-07!53;UBERON:0003133!1.32e-07!48;UBERON:0003343!1.59e-07!4;UBERON:0004785!1.59e-07!4;UBERON:0006562!3.07e-07!11;UBERON:0007196!3.83e-07!14;UBERON:0001558!3.83e-07!14;UBERON:0000464!5.97e-07!104;UBERON:0000166!8.49e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000058;5.41e-08;10!UBERON:0006947;1.86e-07;3!UBERON:0004054;1.86e-07;3!UBERON:0003100;6.76e-07;41!UBERON:0002294;8.13e-07;7!UBERON:0001173;8.13e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004175,6.10e-09,25;UBERON:0003100,2.59e-08,41;UBERON:0005156,4.76e-08,59;UBERON:0000990,4.76e-08,59;UBERON:0006947,1.07e-07,3;UBERON:0004054,1.07e-07,3;UBERON:0003133,5.60e-07,48;UBERON:0004119,5.84e-07,160;UBERON:0000925,5.84e-07,160;UBERON:0006595,5.84e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,1.1240175325762,0.301586917234893,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.53735113621709,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,1.01289087829486,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.768760269460425,1.14851441245126,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0.828851746593443,0,0,0,0,1.79736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,1.53366118706464,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,2.15583274311631,1.13176968554523,0,0,0,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0.195551382734803,0.480952921509202,1.28071796843612,0.19980960958213,0.288180834308212,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,1.5476039091159,0.0607495566580247,1.34173875039706,0.630445658393585,0.681909645754975,0,0,1.72723677587501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66009509324218,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,1.90180911022764,0,0,0,0,0,0.979156554036111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,4.41664733254615,0.11796972334774,0.733714394086716,0.346576998451015,0,0,0,0.150420656698515,0,0,0,0,1.47856086217045,0.0675375846183947,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69354820076372,1.60374807980835,0,0,0,1.47225350422864,1.09726132484042,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0,0,1.07132363163395,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,1.90451545170992,0.322944549180031,0.372448285775147,0,3.81882949668989,3.23387502333151,1.95945073107265,0.684466602170562,1.21233695426258,0.358611026963382,0.332660356546013,1.95367844666339,0,0,0.449126010532934,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,1.1240175325762,0.301586917234893,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.53735113621709,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,1.01289087829486,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.768760269460425,1.14851441245126,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0.828851746593443,0,0,0,0,1.79736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,1.53366118706464,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,2.15583274311631,1.13176968554523,0,0,0,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0.195551382734803,0.480952921509202,1.28071796843612,0.19980960958213,0.288180834308212,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,1.5476039091159,0.0607495566580247,1.34173875039706,0.630445658393585,0.681909645754975,0,0,1.72723677587501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66009509324218,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,1.90180911022764,0,0,0,0,0,0.979156554036111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,4.41664733254615,0.11796972334774,0.733714394086716,0.346576998451015,0,0,0,0.150420656698515,0,0,0,0,1.47856086217045,0.0675375846183947,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69354820076372,1.60374807980835,0,0,0,1.47225350422864,1.09726132484042,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0,0,1.07132363163395,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,1.90451545170992,0.322944549180031,0.372448285775147,0,3.81882949668989,3.23387502333151,1.95945073107265,0.684466602170562,1.21233695426258,0.358611026963382,0.332660356546013,1.95367844666339,0,0,0.449126010532934,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0.320568492303233 | ||
|short_description=p6@AFAP1L2 | |short_description=p6@AFAP1L2 | ||
}} | }} |
Latest revision as of 12:38, 16 September 2015
Short description: | p6@AFAP1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AFAP1L2_5end |
Coexpression cluster: | NA |
Association with transcript: | -354bp_to_ENST00000369271, ENST00000541919, NM_001001936, NM_032550, uc001lbn.2, uc001lbo.2, uc001lbp.2, uc001lbr.1, uc010qse.1_5end |
EntrezGene: | AFAP1L2 |
HGNC: | 25901 |
UniProt: | F6QUH3Q8N4X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.09e-10 | 253 |
endo-epithelial cell | 5.77e-08 | 42 |
placental epithelial cell | 7.14e-08 | 3 |
epithelial cell of prostate | 3.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
internal genitalia | 6.10e-09 | 25 |
female organism | 2.59e-08 | 41 |
reproductive structure | 4.76e-08 | 59 |
reproductive system | 4.76e-08 | 59 |
male genital duct | 1.07e-07 | 3 |
internal male genitalia | 1.07e-07 | 3 |
reproductive organ | 5.60e-07 | 48 |
endoderm-derived structure | 5.84e-07 | 160 |
endoderm | 5.84e-07 | 160 |
presumptive endoderm | 5.84e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.79e-12 | 14 |
signet ring cell adenocarcinoma | 1.81e-10 | 2 |
carcinoma | 2.42e-07 | 106 |