FFCP PHASE1:Hg19::chr20:44640312..44640322,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4318 | |EntrezGene=4318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7176 | |HGNC=7176 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3W7 | |UniProt=F5H3W7 | ||
|association_with_transcript=-231bp_to_ENST00000545925_5end | |association_with_transcript=-231bp_to_ENST00000545925_5end | ||
|cluster_id=chr20:44640312..44640322,+ | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_10_at_MMP9_5end | |description=CAGE_peak_10_at_MMP9_5end | ||
|id=chr20:44640312..44640322,+ | |id=chr20:44640312..44640322,+ | ||
|ontology_enrichment_celltype=CL:0000235!1.43e-26!10;CL:0002009!3.21e-16!65;CL:0000766!6.05e-16!76;CL:0000557!1.15e-14!71;CL:0002194!2.96e-14!63;CL:0000576!2.96e-14!63;CL:0000040!2.96e-14!63;CL:0000559!2.96e-14!63;CL:0000839!1.24e-12!70;CL:0000763!1.25e-11!112;CL:0000049!1.25e-11!112;CL:0000775!8.67e-11!3;CL:0000738!3.95e-10!140;CL:0002031!9.54e-09!124;CL:0002032!3.84e-08!165;CL:0000837!3.84e-08!165;CL:0002087!7.56e-08!119;CL:0000037!1.09e-07!172;CL:0000566!1.09e-07!172;CL:0000988!4.20e-07!182 | |ontology_enrichment_celltype=CL:0000235!1.43e-26!10;CL:0002009!3.21e-16!65;CL:0000766!6.05e-16!76;CL:0000557!1.15e-14!71;CL:0002194!2.96e-14!63;CL:0000576!2.96e-14!63;CL:0000040!2.96e-14!63;CL:0000559!2.96e-14!63;CL:0000839!1.24e-12!70;CL:0000763!1.25e-11!112;CL:0000049!1.25e-11!112;CL:0000775!8.67e-11!3;CL:0000738!3.95e-10!140;CL:0002031!9.54e-09!124;CL:0002032!3.84e-08!165;CL:0000837!3.84e-08!165;CL:0002087!7.56e-08!119;CL:0000037!1.09e-07!172;CL:0000566!1.09e-07!172;CL:0000988!4.20e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000235;7.63e-168;6!CL:0000473;2.01e-22;39!CL:0000234;2.01e-22;39!CL:0000775;1.09e-10;3!CL:0000766;1.10e-09;69!CL:0000763;6.86e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.02e-167,6;CL:0000473,1.94e-21,48;CL:0000234,1.94e-21,48;CL:0000766,3.53e-19,72;CL:0002194,3.20e-17,59;CL:0000576,3.20e-17,59;CL:0000040,3.20e-17,59;CL:0000559,3.20e-17,59;CL:0002009,1.12e-16,61;CL:0000839,1.87e-15,66;CL:0000557,3.12e-15,67;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0000775,9.90e-11,3;CL:0000738,2.51e-10,136;CL:0002087,5.07e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0002031,1.18e-08,120;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000049;7.60e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.86e-17!112;UBERON:0002405!1.32e-16!115;UBERON:0002390!8.42e-15!102;UBERON:0003061!8.42e-15!102;UBERON:0002371!9.14e-13!80;UBERON:0001474!1.02e-11!86;UBERON:0004765!2.78e-11!101;UBERON:0001434!2.78e-11!101;UBERON:0002106!4.82e-10!3;UBERON:0004854!4.82e-10!3;UBERON:0009034!4.82e-10!3;UBERON:0002095!4.82e-10!3;UBERON:0004782!4.82e-10!3;UBERON:0003281!4.82e-10!3;UBERON:0009664!4.82e-10!3;UBERON:0002296!4.82e-10!3;UBERON:0005602!4.82e-10!3;UBERON:0001179!4.82e-10!3;UBERON:0006293!4.82e-10!3;UBERON:0004177!2.27e-09!7;UBERON:0000029!9.46e-09!1;UBERON:0002171!1.48e-08!1;UBERON:0006518!1.48e-08!1;UBERON:0008949!1.48e-08!1;UBERON:0000101!1.48e-08!1;UBERON:0002167!1.48e-08!1;UBERON:0003081!2.48e-08!216;UBERON:0002372!3.79e-08!1;UBERON:0001961!3.79e-08!1;UBERON:0001744!3.79e-08!1;UBERON:0001735!3.79e-08!1;UBERON:0002204!5.61e-08!167 | |ontology_enrichment_uberon=UBERON:0002193!3.86e-17!112;UBERON:0002405!1.32e-16!115;UBERON:0002390!8.42e-15!102;UBERON:0003061!8.42e-15!102;UBERON:0002371!9.14e-13!80;UBERON:0001474!1.02e-11!86;UBERON:0004765!2.78e-11!101;UBERON:0001434!2.78e-11!101;UBERON:0002106!4.82e-10!3;UBERON:0004854!4.82e-10!3;UBERON:0009034!4.82e-10!3;UBERON:0002095!4.82e-10!3;UBERON:0004782!4.82e-10!3;UBERON:0003281!4.82e-10!3;UBERON:0009664!4.82e-10!3;UBERON:0002296!4.82e-10!3;UBERON:0005602!4.82e-10!3;UBERON:0001179!4.82e-10!3;UBERON:0006293!4.82e-10!3;UBERON:0004177!2.27e-09!7;UBERON:0000029!9.46e-09!1;UBERON:0002171!1.48e-08!1;UBERON:0006518!1.48e-08!1;UBERON:0008949!1.48e-08!1;UBERON:0000101!1.48e-08!1;UBERON:0002167!1.48e-08!1;UBERON:0003081!2.48e-08!216;UBERON:0002372!3.79e-08!1;UBERON:0001961!3.79e-08!1;UBERON:0001744!3.79e-08!1;UBERON:0001735!3.79e-08!1;UBERON:0002204!5.61e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-13,76;UBERON:0001474,1.58e-12,82;UBERON:0004765,1.90e-11,90;UBERON:0002405,4.34e-11,93;UBERON:0002390,1.54e-10,98;UBERON:0003061,1.54e-10,98;UBERON:0001434,2.46e-10,100;UBERON:0002193,1.37e-09,108 | |||
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|short_description=p10@MMP9 | |short_description=p10@MMP9 | ||
}} | }} |
Latest revision as of 13:58, 16 September 2015
Short description: | p10@MMP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MMP9_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -231bp_to_ENST00000545925_5end |
EntrezGene: | MMP9 |
HGNC: | 7176 |
UniProt: | F5H3W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.02e-167 | 6 |
defensive cell | 1.94e-21 | 48 |
phagocyte | 1.94e-21 | 48 |
myeloid leukocyte | 3.53e-19 | 72 |
monopoietic cell | 3.20e-17 | 59 |
monocyte | 3.20e-17 | 59 |
monoblast | 3.20e-17 | 59 |
promonocyte | 3.20e-17 | 59 |
macrophage dendritic cell progenitor | 1.12e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.87e-15 | 66 |
granulocyte monocyte progenitor cell | 3.12e-15 | 67 |
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
neutrophil | 9.90e-11 | 3 |
leukocyte | 2.51e-10 | 136 |
nongranular leukocyte | 5.07e-09 | 115 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 1.18e-08 | 120 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-13 | 76 |
bone element | 1.58e-12 | 82 |
skeletal element | 1.90e-11 | 90 |
immune system | 4.34e-11 | 93 |
hematopoietic system | 1.54e-10 | 98 |
blood island | 1.54e-10 | 98 |
skeletal system | 2.46e-10 | 100 |
hemolymphoid system | 1.37e-09 | 108 |