FFCP PHASE1:Hg19::chr7:138145145..138145209,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:138145145..138145209,+
|short_description=p1@TRIM24
|description=CAGE_peak_1_at_TRIM24_5end
|association_with_transcript=0bp_to_ENST00000415680_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8805 | |EntrezGene=8805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11812 | |HGNC=11812 | ||
|TSSclassifier=strong | |||
|UniProt=O15164 | |UniProt=O15164 | ||
|association_with_transcript=0bp_to_ENST00000415680_5end | |||
|cluster_id=chr7:138145145..138145209,+ | |||
|description=CAGE_peak_1_at_TRIM24_5end | |||
|id=chr7:138145145..138145209,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.21e-16!172;CL:0000566!2.21e-16!172;CL:0000763!2.65e-16!112;CL:0000049!2.65e-16!112;CL:0002032!1.46e-15!165;CL:0000837!1.46e-15!165;CL:0000988!1.81e-15!182;CL:0000766!6.96e-09!76;CL:0000839!5.08e-08!70;CL:0000557!9.44e-08!71;CL:0002031!1.49e-07!124;CL:0000738!1.55e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.36e-16,168;CL:0000763,8.09e-16,108;CL:0000049,8.09e-16,108;CL:0002032,4.75e-15,161;CL:0000837,4.75e-15,161;CL:0000988,7.09e-15,177;CL:0000766,1.90e-08,72;CL:0000839,1.37e-07,66;CL:0000557,2.53e-07,67;CL:0002031,3.83e-07,120;CL:0000738,3.92e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!4.76e-14!39;DOID:8692!1.47e-13!31;DOID:2531!1.63e-12!51;DOID:0060083!1.63e-12!51;DOID:0050686!2.84e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.99e-13;31!DOID:1240;5.12e-11;39!DOID:2531;1.76e-08;51!DOID:0060083;1.76e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.76e-14,39;DOID:8692,1.47e-13,31;DOID:2531,1.63e-12,51;DOID:0060083,1.63e-12,51;DOID:0050686,2.84e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0002405!4.96e-11!115;UBERON:0002193!5.91e-09!112;UBERON:0002390!2.34e-08!102;UBERON:0003061!2.34e-08!102;UBERON:0005057!6.30e-07!26 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.60e-08,108;UBERON:0002390,6.27e-08,98;UBERON:0003061,6.27e-08,98;UBERON:0002405,7.85e-07,93 | |||
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| ||
|short_description=p1@TRIM24 | |||
}} | }} |
Latest revision as of 15:00, 16 September 2015
Short description: | p1@TRIM24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000415680_5end |
EntrezGene: | TRIM24 |
HGNC: | 11812 |
UniProt: | O15164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.36e-16 | 168 |
myeloid cell | 8.09e-16 | 108 |
common myeloid progenitor | 8.09e-16 | 108 |
hematopoietic oligopotent progenitor cell | 4.75e-15 | 161 |
hematopoietic multipotent progenitor cell | 4.75e-15 | 161 |
hematopoietic cell | 7.09e-15 | 177 |
myeloid leukocyte | 1.90e-08 | 72 |
myeloid lineage restricted progenitor cell | 1.37e-07 | 66 |
granulocyte monocyte progenitor cell | 2.53e-07 | 67 |
hematopoietic lineage restricted progenitor cell | 3.83e-07 | 120 |
leukocyte | 3.92e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.60e-08 | 108 |
hematopoietic system | 6.27e-08 | 98 |
blood island | 6.27e-08 | 98 |
immune system | 7.85e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.76e-14 | 39 |
myeloid leukemia | 1.47e-13 | 31 |
hematologic cancer | 1.63e-12 | 51 |
immune system cancer | 1.63e-12 | 51 |
organ system cancer | 2.84e-09 | 137 |