FFCP PHASE1:Hg19::chr13:113963951..113964005,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:113963951..113964005,+ to FFCP PHASE1:Hg19::chr13:113963951..113964005,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3916 | |EntrezGene=3916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6499 | |HGNC=6499 | ||
|TSSclassifier=strong | |||
|UniProt=P11279 | |UniProt=P11279 | ||
|association_with_transcript=-94bp_to_BC006345_5end | |||
|cluster_id=chr13:113963951..113964005,+ | |||
|description=CAGE_peak_4_at_LAMP1_5end | |||
|id=chr13:113963951..113964005,+ | |||
|ontology_enrichment_celltype=CL:0000222!7.74e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.67e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.04e-11!659;UBERON:0000480!2.72e-10!626;UBERON:0000467!3.13e-10!625;UBERON:0000926!2.12e-08!448;UBERON:0004120!2.12e-08!448;UBERON:0006603!2.12e-08!448;UBERON:0000922!2.70e-08!612;UBERON:0002050!2.82e-08!605;UBERON:0005423!2.82e-08!605;UBERON:0000923!4.49e-08!604;UBERON:0005291!4.49e-08!604;UBERON:0006598!4.49e-08!604;UBERON:0002532!4.49e-08!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.25e-10,315;UBERON:0004120,2.25e-10,315;UBERON:0006603,2.25e-10,315 | |||
|phase1_expression=1.63510541343501,3.8538094300377,0.422863212287913,7.00513088471913,2.68176656656373,7.85104671690332,2.53299878168311,1.26343974685366,1.56711376919903,0.491467873003018,1.39560233594486,0.436882744260345,2.11013582582763,1.98026164736075,2.98257638155124,8.74022690387308,6.62963980826375,5.11217063271161,4.87932798790507,0.492484232307152,1.02000345622126,2.19418305034661,0.572471974262113,1.64249310087461,1.00434111675842,0.152826811495903,0.410502947249729,0.472264687882075,0,0,0.928896739896456,0.919421224478927,0.90361775633475,1.84877005083394,0.0774672005803016,0,0,0,1.40381113229099,1.08505435357926,1.11957737119962,1.29557466407592,3.09090681161024,0.872389432677388,2.26725566213286,0.970336244751265,1.85943229524548,0,1.23882548358041,3.45230870786581,1.5369642391746,1.18241114944293,2.75796544589295,1.29096936716765,1.35426486594342,2.07066573496865,1.91034305040492,0.898893937780338,1.53041946185451,1.28371610830437,3.19668562899521,4.94776950280074,2.59302754908121,1.70489900213078,2.32167390902867,2.26954089876456,0.622822248995575,2.26123798731069,3.65038042894141,1.73751075764093,2.42159801053347,1.10483290796269,0.316462387440884,0,0.425208599930087,0.209658645508376,0.786300418025466,0.450530678524519,0,0.285012743741249,0.39783335439818,0.91332076882317,0,0,0,0,0,1.14950487990897,0.661044872784862,0,0.569212969109448,1.76171156811282,1.52909291250092,0,0,0,0,0.786021525498329,0.616804496998528,0.334372990781356,0,0,0,0.222820913770347,0.883817722424512,0,0.270803863765016,1.40900451698243,0.910415432919148,0.657751618414705,1.10540007114339,0.289803085735052,0.444859689486181,0.267540828089713,0,0.566546713487831,1.14966148080576,0,0.253019692019503,0.637130828648193,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,1.87208137048455,0.724122019413995,9.75227465255847,5.36560687762909,1.02290049474824,0.361439152384566,1.50401373190767,5.06962816362883,2.3858578411533,4.37971383272372,0.756278537312543,2.66075276955077,1.31752178539689,1.24430121722827,0.728590576585084,2.59549109949101,0.649094787309367,1.39303789839414,3.32394901297163,0.238490624305342,0,0,0.596287222100115,2.58070378531837,1.73570250803797,2.26123176769604,5.45349267072878,1.6507082516404,1.46296476575767,1.55050055501597,1.77883131343355,1.33888245105868,1.20848795132744,3.04108842287405,4.14905497831888,0.735326160691737,5.67099363517232,0.982297011124877,1.79623498100936,1.57656072676651,1.53316637465883,0,1.64881569537367,1.31780417436063,0,2.18047026071267,2.48485975847659,2.15271869829786,0.794455084879313,10.0392817262085,1.41867352879343,5.60677600142307,1.06748995729705,4.44001587150888,0.622422070799533,2.96363478553314,1.30769522490767,0.605429710579726,0.576175924479999,0.937285727335186,0.936480230490962,0.570471821544449,2.54062756938062,1.17434498643765,1.13311061057692,2.24721290723598,0.204154171254893,1.47401180774122,0.723280468230358,1.18800285728205,5.68713937340681,0,0.718618141816238,0.336672227908132,1.50142223846357,0.277064115484183,1.31693286264251,3.98434134538726,2.40380894250555,1.24775401476023,2.51145489964407,0.427114777637135,0.847727604638247,3.90118424909723,0.206105058476878,2.83404594050192,0.930584281657949,0.843881661206331,1.16924406193438,1.7670364197088,0.736399189138395,0.323292113637624,3.19508633264953,0.503760491138201,0.508681776931463,0.386521706326594,1.09098448236334,0.573609190778008,0.853815942907168,0.927708378250397,0.580969714347592,0.829288440122964,1.51392510525377,0.72995471815166,3.12899064659632,3.85944562915731,0,4.17931135228781,5.0531563716871,1.8929088006375,3.03452442140583,2.16909926895134,3.19852520923942,1.08939722046203,1.89816495288877,1.34831308160164,2.15843611637881,3.07797725557112,3.69077727312324,1.40241773803446,0.8231480226628,2.94017422771084,2.53510069643662,0.982827216677626,0.590789906681404,0,1.22988438543114,1.20097467208968,0.98775256867763,1.1240175325762,1.20634766893957,0.185176890317059,0.977424915930974,1.03993478527958,1.44331342025273,0.231860809950154,1.05667824812239,1.29929802984966,3.24089858803628,4.18559134916116,0.790204397959275,2.57545848628462,2.21595305478658,2.34004265139238,6.39113997841531,0,0,0.283550194484773,1.07470227243418,1.16253575405585,1.91691339582606,0,0.176096868026452,0.207328115540772,1.00883967391873,0.37872730027914,0.380987365753014,1.14596527667483,1.17217447210047,5.13217338068116,2.57068731758309,3.00343057843917,1.71495859578347,0.224262168690721,0.87192013766656,0.5867062865676,0.517086863031111,0,2.535908257668,0.797814349754612,3.12022310734098,0.514414748524284,4.25547396069835,3.72991050622539,0.714889968290738,0.542621605391443,4.11620168390384,0.325736184293735,0.710783897485092,0.791951872933429,0.602878754119172,1.74306691720059,1.69954085009497,3.64871341923571,9.04062764577828,16.8667151586425,0.718874566474748,4.59447743336456,0,2.31650090668127,5.13690806375959,1.07436577943937,0.448340575974109,0.197030760201927,1.50939302401662,0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| ||
|short_description=p4@LAMP1 | |||
}} | }} |
Latest revision as of 15:48, 16 September 2015
Short description: | p4@LAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LAMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_BC006345_5end |
EntrezGene: | LAMP1 |
HGNC: | 6499 |
UniProt: | P11279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.67e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.25e-10 | 315 |
mesoderm-derived structure | 2.25e-10 | 315 |
presumptive mesoderm | 2.25e-10 | 315 |