FFCP PHASE1:Hg19::chr8:134262711..134262736,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:134262711..134262736,- to FFCP PHASE1:Hg19::chr8:134262711..134262736,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10397 | |EntrezGene=10397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7679 | |HGNC=7679 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000522665_5end | |||
|cluster_id=chr8:134262711..134262736,- | |||
|coexpression_cluster_id=C862 | |||
|description=CAGE_peak_8_at_NDRG1_5end | |||
|id=chr8:134262711..134262736,- | |||
|ontology_enrichment_celltype=CL:0002057!5.64e-08!42;CL:0000860!2.75e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.92e-12;13!CL:0000860;8.58e-12;33!CL:0002057;8.58e-12;33!CL:0000473;8.44e-10;39!CL:0000234;8.44e-10;39!CL:0002076;4.98e-09;42!CL:0002231;3.89e-07;3!CL:0002541;7.01e-07;3!CL:0002328;8.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.03e-12,13;CL:0002076,1.59e-10,42;CL:0000473,2.68e-10,48;CL:0000234,2.68e-10,48;CL:0000860,5.42e-10,42;CL:0002057,5.42e-10,42;CL:0002194,9.23e-08,59;CL:0000576,9.23e-08,59;CL:0000040,9.23e-08,59;CL:0000559,9.23e-08,59;CL:0002009,1.95e-07,61;CL:0002231,4.47e-07,3;CL:0000223,5.01e-07,58;CL:0002541,5.18e-07,3;CL:0002328,6.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.01e-07;3!UBERON:0000920;7.01e-07;3!UBERON:0004815;8.23e-07;3!UBERON:0002031;8.23e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.18e-07,3;UBERON:0004815,6.36e-07,3;UBERON:0002031,6.36e-07,3 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,1.50602959389125,2.58827807116751,0,0,0.293600439334847,0,0.401088894940283,0,0,0,0.257575567634187,0.290796477559129,0.755751887377619,1.4555043671269,0.232429036905685,0.411167888021826,0,0,0.768482119587302,0.47296445977717,0.344745680736619,0.645484683583826,1.35426486594342,1.50593871634084,0.818718450173537,0.224723484445085,1.22433556948361,0.962787081228281,0.639337125799041,0,0.797854630486527,0.426224750532694,1.7412554317715,1.70215567407342,0,1.25624332628372,1.0429658368404,0.217188844705117,1.21079900526674,1.10483290796269,1.58231193720442,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.411202997999018,0.334372990781356,0,0,0,0.334231370655521,0,0,0,0.384273959177026,0,0,0,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0,0,1.00267582127178,0.144846518960824,0.795285947051099,1.94653948121054,0,0,0,0.130979075497713,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,1.74437620857014,0.993943903390637,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0.113432183160021,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0.257640540045629,0,0,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0.773043412653187,0,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0.354920400119532,0,0.482022059766964,0,0.435758888184812,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,1.64625428112938,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0.985143749731331,0.581267877027924,0.766765358330422,0.492663237895943,0,0.207328115540772,0.144119953416961,0.50496973370552,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,4.21667878966063,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0.306923946576125,0.561320188866147,0.896974044789907,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,2.00506470303285,3.22283461275637,0.34444334449382,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0,0,1.30012049207304,0,0.193341436584244,0,0,0.137836572484531,0.214840489736547,0,0,0,3.8015530533025,2.11409074101617,0.382838137483752,4.95673126192195,1.39453664789186,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0.551365343546124,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0.282431402330337,0.43050537267123,1.68471475667626,3.54744122829341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0.324621940274555,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0.73254089635947,0,0.222886768554957,0,0.23874448473769,0.593929361665277,2.45728561679386,0,0.140669416410513,0.445234820091624,0.16480387422676,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0.41827123283581,0.692552326534174,0,0,0,0,1.5950057986596,0.0915975934018623,3.73124343213044,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0.442287822516696,2.4441205797345,0,0,0,0.471807930864739,0,0.702793337176017,0,0,0.242780379534093,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0.174118413160805,0.17472666824203,0,0,0,0.164230914106418,0.290967049465258,0,0.677942222341597,0.411125773940253,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0.432271251462318,0,0,0.720273989940749,0.124252535565433,0,0,0,0.101998217636322,0.288950589901519,0,0.547621515567972,0,0,0,0.837847203816763,0,0.717873024576814,0,0.429226048136571,0.223171457441873,0,0.720599767084807,0,0,0.0824158583811665,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0.06074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| ||
|short_description=p8@NDRG1 | |||
}} | }} |
Latest revision as of 16:03, 16 September 2015
Short description: | p8@NDRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NDRG1_5end |
Coexpression cluster: | C862_renal_Urothelial_Small_Esophageal_colon_Prostate_amniotic |
Association with transcript: | -8bp_to_ENST00000522665_5end |
EntrezGene: | NDRG1 |
HGNC: | 7679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 6.03e-12 | 13 |
endo-epithelial cell | 1.59e-10 | 42 |
defensive cell | 2.68e-10 | 48 |
phagocyte | 2.68e-10 | 48 |
classical monocyte | 5.42e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.42e-10 | 42 |
monopoietic cell | 9.23e-08 | 59 |
monocyte | 9.23e-08 | 59 |
monoblast | 9.23e-08 | 59 |
promonocyte | 9.23e-08 | 59 |
macrophage dendritic cell progenitor | 1.95e-07 | 61 |
epithelial cell of prostate | 4.47e-07 | 3 |
endodermal cell | 5.01e-07 | 58 |
chorionic membrane mesenchymal stem cell | 5.18e-07 | 3 |
bronchial epithelial cell | 6.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.18e-07 | 3 |
lower respiratory tract epithelium | 6.36e-07 | 3 |
epithelium of bronchus | 6.36e-07 | 3 |