FFCP PHASE1:Hg19::chr16:4431154..4431171,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:4431154..4431171,+
|short_description=p6@VASN
|description=CAGE_peak_6_at_VASN_5end
|association_with_transcript=59bp_to_BC013767_5end
|EntrezGene=114990...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114990 | |EntrezGene=114990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18517 | |HGNC=18517 | ||
|TSSclassifier=strong | |||
|UniProt=Q6EMK4 | |UniProt=Q6EMK4 | ||
|association_with_transcript=59bp_to_BC013767_5end | |||
|cluster_id=chr16:4431154..4431171,+ | |||
|description=CAGE_peak_6_at_VASN_5end | |||
|id=chr16:4431154..4431171,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.95e-26!180;CL:0000057!1.53e-20!75;CL:0002620!3.09e-11!23;CL:0002334!1.66e-09!12;CL:0000680!6.45e-08!57;CL:0000056!6.45e-08!57;CL:0000355!6.45e-08!57;CL:0000048!1.46e-07!430;CL:0000187!2.10e-07!54;CL:0000183!4.37e-07!59;CL:0000723!6.06e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000346;5.78e-09;3!CL:1000428;5.78e-09;3!CL:0002334;8.97e-08;12!CL:0002540;1.33e-07;6!CL:0002617;1.85e-07;2!CL:0000134;7.11e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.57e-15,76;CL:0000048,1.86e-10,427;CL:0000723,4.04e-10,433;CL:0000034,1.10e-09,441;CL:0000346,1.66e-09,3;CL:1000428,1.66e-09,3;CL:0002320,6.93e-09,361;CL:0000134,1.04e-08,354;CL:0002540,8.25e-08,6;CL:0002334,1.02e-07,12;CL:0002617,1.84e-07,2;CL:0000219,6.11e-07,386;CL:0002620,7.84e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.83e-10!83;UBERON:0002329!2.83e-10!83;UBERON:0003077!2.83e-10!83;UBERON:0003059!2.83e-10!83;UBERON:0007282!2.83e-10!83;UBERON:0009618!2.83e-10!83;UBERON:0007285!2.83e-10!83;UBERON:0003102!1.55e-09!95;UBERON:0005256!3.29e-09!143;UBERON:0004290!5.88e-09!70;UBERON:0002100!1.28e-08!216;UBERON:0002097!2.17e-08!40;UBERON:0000475!3.15e-08!365;UBERON:0000486!3.26e-08!82;UBERON:0002199!3.28e-08!45;UBERON:0002416!3.28e-08!45;UBERON:0001134!9.83e-07!61;UBERON:0002036!9.83e-07!61;UBERON:0003082!9.83e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;5.57e-10;10!UBERON:0001443;5.26e-09;11!UBERON:0000412;5.78e-09;3!UBERON:0001992;5.78e-09;3!UBERON:0005406;6.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.86e-10,10;UBERON:0000412,1.66e-09,3;UBERON:0001992,1.66e-09,3;UBERON:0003102,2.07e-09,99;UBERON:0001443,4.65e-09,11;UBERON:0002384,2.51e-08,371;UBERON:0002199,1.07e-07,46;UBERON:0002416,1.07e-07,46;UBERON:0002097,1.34e-07,41;UBERON:0005406,4.18e-07,2 | |||
|phase1_expression=2.36181893051724,3.42560838225573,1.55049844505568,0,0.893922188854576,2.61701557230111,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.869079113764942,0.795285947051099,0.486634870302636,0.0945348171640679,0.665188192387692,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.132409180813219,4.87622255272983,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0,0,0,0,0,0.936480230490962,0,0.597794722207204,0.352303495931295,0,0.140450806702248,0,0.122834317311768,1.13658359293342,0,2.47266929278557,0,2.15585442544872,0.168336113954066,0.125118519871964,0,1.31693286264251,1.22595118319608,0.751190294532984,0.113432183160021,1.79389635688862,0.427114777637135,0.423863802319124,1.20036438433761,0.515262646192195,1.8034837803194,0.930584281657949,1.18143432568886,1.07180705677318,2.27190396819703,0.644349290496095,1.77810662500693,3.19508633264953,0.503760491138201,0.508681776931463,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0.464367928031979,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,1.62904152655162,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0,0.517086863031111,0,0,1.32969058292435,1.04007436911366,0,1.41849132023278,1.0656887160644,0.714889968290738,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,0.821905290201534,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,1.03985430765404,1.24900292158013,0.473107245101804,0.585707074963566,0,9.09630016223939,6.2083842775503,0,0.184369168541703,0.781952530212746,0.195801157462741,0,0,0,0,0.303127571446259,0,0,1.24053903909388,0.460385919864187,1.12264037773229,1.92208723883551,0.511707249066704,0.965123526861645,1.48418066444991,0.771048469013278,1.24293207719189,0.328508624055237,1.03850885836724,0.813472649219715,0,0.40101294060657,0.0920809889358963,0.114814448164607,1.0925470080403,1.57349297951309,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0.976135183992909,0,0.27470839445503,0,0,0,1.6068392984416,0.290012154876366,0.154048617114644,1.07452572308291,0.413509717453592,0.107420244868274,0.290033387828457,0.340906509664404,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0.464845549297286,3.46293581513704,0,2.46426864140871,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0.38126038784765,0.767693373934002,0,0.636406495851874,0,0.179872457583315,1.09814811894422,0.589062011728432,0.202182481573316,0,0,0.48763373908959,0.487426979262569,1.05650146756755,0.818999468447914,1.97967604735198,1.13008116620243,0,2.65375590096488,2.19225442626881,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,2.11107635297664,2.30506425071931,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.593929361665277,0,0,0.140669416410513,0.111308705022906,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0.957003479195758,0.824378340616761,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.694238953340524,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0.320635281006135,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0.288950589901519,0.600420288709789,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0.179287339332845,0,0,0,0,0.542999601753713,1.72844298240254,1.30634944043764,0,0,0,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0.235265819698172,0,0,0.74627401443437,0.934853239388898,1.10961172300523,0.947015026375446,1.76097531226803,1.77962244319307,1.14420034198462,0.756154618816195,1.08806040407946,0.443565449968902,0.318593534327405,0,0.155262956876259,0.829412415681711,0.265841714557995,0.521745061811734,0.150257608997218,1.14241563650639,0,0,0,0,0.796191777397232,0,2.06037423109676,1.01024846629776,0,0,1.28664954824955,1.30497145982606,0.906823702049089,0,0,0,0,0,0.176689145945881,0.38582807654183,0.506827321959218,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0.736423801007363,0.139879507719444,0,0,0,0,0.218419276384028,0,0,0.123935764259002,0,0.636008701306837,0,0,2.46873160583479,1.531227386766,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.601682626794058,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0.431855182437243,0,0.214429632529969,0,0,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0.223710863595585,0,0,0,0,0,1.45713297917742,0,0.397901550322736,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0.458729283404541,0.143339583151451,0.473314686579554,0.0679914901909147,0.436350690340377,0,1.48798007266701,0.462175628631418,1.29787968637137,0,0,0,0.101988829741982,0,0,0,0.303114792872958,0.535928260312357,0,0,0,0.476128862927481,0.0645889098360061,0,0.224263725161227,0.445530107947154,0.606351566874658,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=2.36181893051724,3.42560838225573,1.55049844505568,0,0.893922188854576,2.61701557230111,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.869079113764942,0.795285947051099,0.486634870302636,0.0945348171640679,0.665188192387692,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.132409180813219,4.87622255272983,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0,0,0,0,0,0.936480230490962,0,0.597794722207204,0.352303495931295,0,0.140450806702248,0,0.122834317311768,1.13658359293342,0,2.47266929278557,0,2.15585442544872,0.168336113954066,0.125118519871964,0,1.31693286264251,1.22595118319608,0.751190294532984,0.113432183160021,1.79389635688862,0.427114777637135,0.423863802319124,1.20036438433761,0.515262646192195,1.8034837803194,0.930584281657949,1.18143432568886,1.07180705677318,2.27190396819703,0.644349290496095,1.77810662500693,3.19508633264953,0.503760491138201,0.508681776931463,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0.464367928031979,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,1.62904152655162,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0,0.517086863031111,0,0,1.32969058292435,1.04007436911366,0,1.41849132023278,1.0656887160644,0.714889968290738,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,0.821905290201534,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,1.03985430765404,1.24900292158013,0.473107245101804,0.585707074963566,0,9.09630016223939,6.2083842775503,0,0.184369168541703,0.781952530212746,0.195801157462741,0,0,0,0,0.303127571446259,0,0,1.24053903909388,0.460385919864187,1.12264037773229,1.92208723883551,0.511707249066704,0.965123526861645,1.48418066444991,0.771048469013278,1.24293207719189,0.328508624055237,1.03850885836724,0.813472649219715,0,0.40101294060657,0.0920809889358963,0.114814448164607,1.0925470080403,1.57349297951309,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0.976135183992909,0,0.27470839445503,0,0,0,1.6068392984416,0.290012154876366,0.154048617114644,1.07452572308291,0.413509717453592,0.107420244868274,0.290033387828457,0.340906509664404,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0.464845549297286,3.46293581513704,0,2.46426864140871,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0.38126038784765,0.767693373934002,0,0.636406495851874,0,0.179872457583315,1.09814811894422,0.589062011728432,0.202182481573316,0,0,0.48763373908959,0.487426979262569,1.05650146756755,0.818999468447914,1.97967604735198,1.13008116620243,0,2.65375590096488,2.19225442626881,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,2.11107635297664,2.30506425071931,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.593929361665277,0,0,0.140669416410513,0.111308705022906,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0.957003479195758,0.824378340616761,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.694238953340524,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0.320635281006135,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0.288950589901519,0.600420288709789,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0.179287339332845,0,0,0,0,0.542999601753713,1.72844298240254,1.30634944043764,0,0,0,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0.235265819698172,0,0,0.74627401443437,0.934853239388898,1.10961172300523,0.947015026375446,1.76097531226803,1.77962244319307,1.14420034198462,0.756154618816195,1.08806040407946,0.443565449968902,0.318593534327405,0,0.155262956876259,0.829412415681711,0.265841714557995,0.521745061811734,0.150257608997218,1.14241563650639,0,0,0,0,0.796191777397232,0,2.06037423109676,1.01024846629776,0,0,1.28664954824955,1.30497145982606,0.906823702049089,0,0,0,0,0,0.176689145945881,0.38582807654183,0.506827321959218,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0.736423801007363,0.139879507719444,0,0,0,0,0.218419276384028,0,0,0.123935764259002,0,0.636008701306837,0,0,2.46873160583479,1.531227386766,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.601682626794058,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0.431855182437243,0,0.214429632529969,0,0,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0.223710863595585,0,0,0,0,0,1.45713297917742,0,0.397901550322736,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0.458729283404541,0.143339583151451,0.473314686579554,0.0679914901909147,0.436350690340377,0,1.48798007266701,0.462175628631418,1.29787968637137,0,0,0,0.101988829741982,0,0,0,0.303114792872958,0.535928260312357,0,0,0,0.476128862927481,0.0645889098360061,0,0.224263725161227,0.445530107947154,0.606351566874658,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p6@VASN | |||
}} | }} |
Latest revision as of 16:19, 16 September 2015
Short description: | p6@VASN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VASN_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_BC013767_5end |
EntrezGene: | VASN |
HGNC: | 18517 |
UniProt: | Q6EMK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.57e-15 | 76 |
multi fate stem cell | 1.86e-10 | 427 |
somatic stem cell | 4.04e-10 | 433 |
stem cell | 1.10e-09 | 441 |
hair follicle dermal papilla cell | 1.66e-09 | 3 |
stem cell of epidermis | 1.66e-09 | 3 |
connective tissue cell | 6.93e-09 | 361 |
mesenchymal cell | 1.04e-08 | 354 |
mesenchymal stem cell of the bone marrow | 8.25e-08 | 6 |
preadipocyte | 1.02e-07 | 12 |
adipocyte of breast | 1.84e-07 | 2 |
motile cell | 6.11e-07 | 386 |
skin fibroblast | 7.84e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
breast | 4.86e-10 | 10 |
dermal papilla | 1.66e-09 | 3 |
papillary layer of dermis | 1.66e-09 | 3 |
surface structure | 2.07e-09 | 99 |
chest | 4.65e-09 | 11 |
connective tissue | 2.51e-08 | 371 |
integument | 1.07e-07 | 46 |
integumental system | 1.07e-07 | 46 |
skin of body | 1.34e-07 | 41 |
perirenal fat | 4.18e-07 | 2 |