FFCP PHASE1:Hg19::chr2:27851106..27851120,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11321 | |EntrezGene=11321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17030 | |HGNC=17030 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQJ5 | |UniProt=B4DQJ5 | ||
|association_with_transcript=0bp_to_ENST00000481754,ENST00000515877_5end | |association_with_transcript=0bp_to_ENST00000481754,ENST00000515877_5end | ||
|cluster_id=chr2:27851106..27851120,+ | |||
|coexpression_cluster_id=C741 | |||
|description=CAGE_peak_2_at_GPN1_5end | |description=CAGE_peak_2_at_GPN1_5end | ||
|id=chr2:27851106..27851120,+ | |id=chr2:27851106..27851120,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.37e-12!42;CL:0000860!1.38e-11!45;CL:0000766!2.99e-10!76;CL:0000548!5.52e-09!679;CL:0000004!5.52e-09!679;CL:0000255!5.52e-09!679;CL:0000557!9.36e-09!71;CL:0000012!1.22e-08!682;CL:0002009!1.59e-08!65;CL:0000144!6.38e-08!625;CL:0002194!1.89e-07!63;CL:0000576!1.89e-07!63;CL:0000040!1.89e-07!63;CL:0000559!1.89e-07!63;CL:0000839!2.01e-07!70;CL:0000003!6.05e-07!722;CL:0002371!6.48e-07!591 | |ontology_enrichment_celltype=CL:0002057!1.37e-12!42;CL:0000860!1.38e-11!45;CL:0000766!2.99e-10!76;CL:0000548!5.52e-09!679;CL:0000004!5.52e-09!679;CL:0000255!5.52e-09!679;CL:0000557!9.36e-09!71;CL:0000012!1.22e-08!682;CL:0002009!1.59e-08!65;CL:0000144!6.38e-08!625;CL:0002194!1.89e-07!63;CL:0000576!1.89e-07!63;CL:0000040!1.89e-07!63;CL:0000559!1.89e-07!63;CL:0000839!2.01e-07!70;CL:0000003!6.05e-07!722;CL:0002371!6.48e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002605;4.14e-12;3!CL:0000767;9.56e-12;3!CL:0002166;9.91e-12;3!CL:0000094;5.16e-11;8!CL:0001014;6.67e-09;2!CL:0001016;6.67e-09;2!CL:0000128;7.51e-09;7!CL:0000126;7.51e-09;7!CL:0000127;7.51e-09;7!CL:0000081;6.45e-08;11!CL:0000159;8.89e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.03e-12,3;CL:0002166,5.21e-12,3;CL:0000767,1.43e-11,3;CL:0000094,7.02e-11,8;CL:0001014,6.35e-09,2;CL:0001016,6.35e-09,2;CL:0000128,7.12e-09,7;CL:0000126,7.12e-09,7;CL:0000127,7.12e-09,7;CL:0002453,7.12e-09,7;CL:0000766,1.27e-08,72;CL:0000081,8.01e-08,11;CL:0000159,9.26e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.77e-07!80;UBERON:0001474!6.26e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!1.77e-07!80;UBERON:0001474!6.26e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;6.75e-09;4!UBERON:0008895;6.75e-09;4!UBERON:0011159;3.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,4.19e-09,4;UBERON:0008895,4.19e-09,4;UBERON:0011159,2.36e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,0.697801167972428,1.09220686065086,0.791300934685361,0.495065411840187,0,0,1.20538905604795,0.730310090387373,0,0.246242116153576,0.204000691244253,0.626909442956176,2.57612388417951,3.42186062682211,7.78364365487777,0,0,0,5.90046415273356,1.15148819429164,4.64448369948228,0,0,0,0,0,0,11.0799081706375,7.82123345133553,8.46342395791822,0,0,0,0.581592955118259,0,0.485168122375632,0.232429036905685,0,0.929119112685311,0.28769239232215,0.256160706529101,0.236482229888585,1.72372840368309,0.645484683583826,0,0.752969358170419,0,0.674170453335254,1.53041946185451,0.962787081228281,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,2.4912889959823,0.75374599577023,0.521482918420201,0,1.81619850790011,1.10483290796269,0.949387162322653,0.422510572623884,0.425208599930087,0.419317291016752,1.34794357375794,0.750884464207532,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.616804496998528,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.724232594804119,0,1.45990461090791,0.378139268656271,0.886917589850256,1.58102614247627,0,0,0,0,0,0,0.953962497221368,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,2.1185468930115,0.573673241497627,0,0,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0.966304265816484,0.545492241181669,1.72082757233402,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,1.97550513735526,0,0,0,0,0,4.3299402607582,0.115930404975077,1.17408694235822,0,0,0,0,0,0,0,0,1.87467667973554,8.7350706663407,2.83550194484773,0.53735113621709,0.290633938513962,0,0,0,1.86595303986695,0.144119953416961,1.00993946741104,0,0,0,0,0,0,0,0,0.43596006883328,0,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0.434343920002738,0,0,0,0.197030760201927,0.862510299438069,0.898401253958239,0.508189248444927,0,0.773288812777695,1.67516265334349,1.91381625495949,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0,0.413536052245775,1.50999940573032,1.60091336705167,0.909382714338778,0,0,0.248107807818777,0.460385919864187,0,0,0,0.482561763430822,0,0.308419387605311,0,0.246381468041427,0,0.116210378459959,0.241718899183244,1.60405176242628,0.368323955743585,0.114814448164607,0,0.131124414959424,0,0.924184045252977,0.784349769176855,0,1.37217117560738,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,0.206082023295445,0.366277859273374,0.082509499920588,0.574265537996172,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.330569830721956,0.192190067365106,0.255225424989168,0.10115778085555,0.464845549297286,3.1481234683064,1.3940745403212,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0.243713489631284,0,0,0,0,0,1.99031692572366,0,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0.491245205065606,0,0,0,0,0,0.349934720244983,0,0.670302275535787,1.08890984861323,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,1.22864280839693,0,0,0,0.16480387422676,0,0.398495976502139,0,0,2.76125442755818,0.123084805461069,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,1.14262965711403,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0.195984794828755,1.82824333818845,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0.195551382734803,1.20238230377301,0.213452994739353,0,0,0,0,0.14405479798815,0.99402028452346,0.235694034616795,0.67952103036807,0.418411385249333,0,0.577901179803038,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,7.87408620430252,21.6664547276226,0,0.335434687599266,0.157611414598396,0.157363764404994,0.316801009558219,0,0.191915197319445,0,0,0.25426853765475,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0.387848869084652,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0.50313580350515,0,0,0.151230923763239,0.15543720058278,0.591420599958536,0.159296767163702,0,0.155262956876259,0,0,1.04349012362347,0.751288044986092,0,0,0.181848659202559,0.214821114084977,1.39210127963548,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0.308801447160972,0,0.353378291891762,1.92914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.392590874004102,0,0,0.577628330751691,0.762764190934334,0,0,0,2.21875575573872,0,0,0.163771917510097,0.591424344868181,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0,0,0.342976018874837,0.0679697329768317,0,0.236387681767936,0.333694205676207,0,0,0,0,7.55746569265175,0,0,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0.766920642832419,0,0.9164274741762,0.31020638566432,0,1.56597604516909,0,0.121917924982269,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0.178553938605658,0,0.160482733378337,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0.620747142958579,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0.215166616178029,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,0.697801167972428,1.09220686065086,0.791300934685361,0.495065411840187,0,0,1.20538905604795,0.730310090387373,0,0.246242116153576,0.204000691244253,0.626909442956176,2.57612388417951,3.42186062682211,7.78364365487777,0,0,0,5.90046415273356,1.15148819429164,4.64448369948228,0,0,0,0,0,0,11.0799081706375,7.82123345133553,8.46342395791822,0,0,0,0.581592955118259,0,0.485168122375632,0.232429036905685,0,0.929119112685311,0.28769239232215,0.256160706529101,0.236482229888585,1.72372840368309,0.645484683583826,0,0.752969358170419,0,0.674170453335254,1.53041946185451,0.962787081228281,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,2.4912889959823,0.75374599577023,0.521482918420201,0,1.81619850790011,1.10483290796269,0.949387162322653,0.422510572623884,0.425208599930087,0.419317291016752,1.34794357375794,0.750884464207532,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.616804496998528,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.724232594804119,0,1.45990461090791,0.378139268656271,0.886917589850256,1.58102614247627,0,0,0,0,0,0,0.953962497221368,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,2.1185468930115,0.573673241497627,0,0,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0.966304265816484,0.545492241181669,1.72082757233402,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,1.97550513735526,0,0,0,0,0,4.3299402607582,0.115930404975077,1.17408694235822,0,0,0,0,0,0,0,0,1.87467667973554,8.7350706663407,2.83550194484773,0.53735113621709,0.290633938513962,0,0,0,1.86595303986695,0.144119953416961,1.00993946741104,0,0,0,0,0,0,0,0,0.43596006883328,0,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0.434343920002738,0,0,0,0.197030760201927,0.862510299438069,0.898401253958239,0.508189248444927,0,0.773288812777695,1.67516265334349,1.91381625495949,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0,0.413536052245775,1.50999940573032,1.60091336705167,0.909382714338778,0,0,0.248107807818777,0.460385919864187,0,0,0,0.482561763430822,0,0.308419387605311,0,0.246381468041427,0,0.116210378459959,0.241718899183244,1.60405176242628,0.368323955743585,0.114814448164607,0,0.131124414959424,0,0.924184045252977,0.784349769176855,0,1.37217117560738,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,0.206082023295445,0.366277859273374,0.082509499920588,0.574265537996172,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.330569830721956,0.192190067365106,0.255225424989168,0.10115778085555,0.464845549297286,3.1481234683064,1.3940745403212,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0.243713489631284,0,0,0,0,0,1.99031692572366,0,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0.491245205065606,0,0,0,0,0,0.349934720244983,0,0.670302275535787,1.08890984861323,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,1.22864280839693,0,0,0,0.16480387422676,0,0.398495976502139,0,0,2.76125442755818,0.123084805461069,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,1.14262965711403,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0.195984794828755,1.82824333818845,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0.195551382734803,1.20238230377301,0.213452994739353,0,0,0,0,0.14405479798815,0.99402028452346,0.235694034616795,0.67952103036807,0.418411385249333,0,0.577901179803038,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,7.87408620430252,21.6664547276226,0,0.335434687599266,0.157611414598396,0.157363764404994,0.316801009558219,0,0.191915197319445,0,0,0.25426853765475,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0.387848869084652,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0.50313580350515,0,0,0.151230923763239,0.15543720058278,0.591420599958536,0.159296767163702,0,0.155262956876259,0,0,1.04349012362347,0.751288044986092,0,0,0.181848659202559,0.214821114084977,1.39210127963548,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0.308801447160972,0,0.353378291891762,1.92914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.392590874004102,0,0,0.577628330751691,0.762764190934334,0,0,0,2.21875575573872,0,0,0.163771917510097,0.591424344868181,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0,0,0.342976018874837,0.0679697329768317,0,0.236387681767936,0.333694205676207,0,0,0,0,7.55746569265175,0,0,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0.766920642832419,0,0.9164274741762,0.31020638566432,0,1.56597604516909,0,0.121917924982269,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0.178553938605658,0,0.160482733378337,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0.620747142958579,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0.215166616178029,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@GPN1 | |short_description=p2@GPN1 | ||
}} | }} |
Latest revision as of 17:53, 16 September 2015
Short description: | p2@GPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPN1_5end |
Coexpression cluster: | C741_immature_CD14_Basophils_Peripheral_Mallassezderived_Astrocyte_renal |
Association with transcript: | 0bp_to_ENST00000481754, ENST00000515877_5end |
EntrezGene: | GPN1 |
HGNC: | 17030 |
UniProt: | B4DQJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.03e-12 | 3 |
epithelial cell of Malassez | 5.21e-12 | 3 |
basophil | 1.43e-11 | 3 |
granulocyte | 7.02e-11 | 8 |
CD1a-positive Langerhans cell | 6.35e-09 | 2 |
immature CD1a-positive Langerhans cell | 6.35e-09 | 2 |
oligodendrocyte | 7.12e-09 | 7 |
macroglial cell | 7.12e-09 | 7 |
astrocyte | 7.12e-09 | 7 |
oligodendrocyte precursor cell | 7.12e-09 | 7 |
myeloid leukocyte | 1.27e-08 | 72 |
blood cell | 8.01e-08 | 11 |
seromucus secreting cell | 9.26e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 4.19e-09 | 4 |
splanchnocranium | 4.19e-09 | 4 |
primary subdivision of cranial skeletal system | 2.36e-07 | 5 |