FFCP PHASE1:Hg19::chr12:11905315..11905321,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2120 | |EntrezGene=2120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3495 | |HGNC=3495 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-113bp_to_ENST00000545027_5end | |association_with_transcript=-113bp_to_ENST00000545027_5end | ||
|cluster_id=chr12:11905315..11905321,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_30_at_ETV6_5end | |description=CAGE_peak_30_at_ETV6_5end | ||
|id=chr12:11905315..11905321,+ | |id=chr12:11905315..11905321,+ | ||
|ontology_enrichment_celltype=CL:0000819!5.56e-16!1;CL:0000785!1.20e-08!2;CL:0000955!1.20e-08!2;CL:0000818!1.20e-08!2;CL:0000954!1.20e-08!2;CL:0000816!1.20e-08!2;CL:0002087!7.10e-07!119 | |ontology_enrichment_celltype=CL:0000819!5.56e-16!1;CL:0000785!1.20e-08!2;CL:0000955!1.20e-08!2;CL:0000818!1.20e-08!2;CL:0000954!1.20e-08!2;CL:0000816!1.20e-08!2;CL:0002087!7.10e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000785;1.23e-66;1!CL:0000819;1.23e-66;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.23e-66,1;CL:0000785,3.61e-34,2;CL:0000955,3.61e-34,2;CL:0000818,3.61e-34,2;CL:0000954,3.61e-34,2;CL:0000816,3.61e-34,2;CL:0000817,2.62e-23,3 | |||
|ontology_enrichment_development_v019=CL:0000954;3.61e-34;2 | |||
|ontology_enrichment_disease=DOID:0060073!5.56e-16!1;DOID:8675!5.56e-16!1;DOID:12603!7.46e-16!1;DOID:0060058!9.76e-07!10 | |ontology_enrichment_disease=DOID:0060073!5.56e-16!1;DOID:8675!5.56e-16!1;DOID:12603!7.46e-16!1;DOID:0060058!9.76e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.23e-66;1!DOID:8675;1.23e-66;1!DOID:12603;3.34e-66;1!DOID:2531;8.46e-11;51!DOID:0060083;8.46e-11;51!DOID:0060058;5.73e-08;10!DOID:1240;1.03e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.23e-66,1;DOID:8675,1.23e-66,1;DOID:12603,4.66e-66,1;DOID:2531,1.06e-12,51;DOID:0060083,1.06e-12,51;DOID:0060058,5.73e-08,10;DOID:1240,7.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007190!3.66e-15!1;UBERON:0002370!4.23e-15!4;UBERON:0005058!4.23e-15!4;UBERON:0009113!4.23e-15!4;UBERON:0003295!4.23e-15!4;UBERON:0005562!4.23e-15!4;UBERON:0000974!2.25e-13!10;UBERON:0009722!3.51e-12!11;UBERON:0007690!3.51e-12!11;UBERON:0003351!2.19e-10!6;UBERON:0008814!4.36e-09!15;UBERON:0004177!4.95e-09!7;UBERON:0000341!1.86e-08!2 | |ontology_enrichment_uberon=UBERON:0007190!3.66e-15!1;UBERON:0002370!4.23e-15!4;UBERON:0005058!4.23e-15!4;UBERON:0009113!4.23e-15!4;UBERON:0003295!4.23e-15!4;UBERON:0005562!4.23e-15!4;UBERON:0000974!2.25e-13!10;UBERON:0009722!3.51e-12!11;UBERON:0007690!3.51e-12!11;UBERON:0003351!2.19e-10!6;UBERON:0008814!4.36e-09!15;UBERON:0004177!4.95e-09!7;UBERON:0000341!1.86e-08!2 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p30@ETV6 | |short_description=p30@ETV6 | ||
}} | }} |
Latest revision as of 17:55, 16 September 2015
Short description: | p30@ETV6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_ETV6_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | -113bp_to_ENST00000545027_5end |
EntrezGene: | ETV6 |
HGNC: | 3495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.23e-66 | 1 |
mature B cell | 3.61e-34 | 2 |
pre-B-II cell | 3.61e-34 | 2 |
transitional stage B cell | 3.61e-34 | 2 |
small pre-B-II cell | 3.61e-34 | 2 |
immature B cell | 3.61e-34 | 2 |
precursor B cell | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.23e-66 | 1 |
lymphosarcoma | 1.23e-66 | 1 |
acute leukemia | 4.66e-66 | 1 |
hematologic cancer | 1.06e-12 | 51 |
immune system cancer | 1.06e-12 | 51 |
lymphoma | 5.73e-08 | 10 |
leukemia | 7.07e-08 | 39 |