FFCP PHASE2:Hg19::chr17:61996393..61996421,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2688,entrezgene:1444 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGN...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2688,1444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4261,2442 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B1A4G9,A6NEF6,Q14406,B1A4G6,P01241,B1A4G7,B1A4H0 | ||
|association_with_transcript=-195bp_to_ENST00000342364,ENST00000351388,ENST00000392824,NM_000515,NM_022559,NM_022560,NM_022561,NM_022562,uc002jdi.2,uc002jdj.2,uc002jdk.2,uc002jdl.2,uc002jdm.2,uc002jdn.2_5end | |association_with_transcript=-195bp_to_ENST00000342364,ENST00000351388,ENST00000392824,NM_000515,NM_022559,NM_022560,NM_022561,NM_022562,uc002jdi.2,uc002jdj.2,uc002jdk.2,uc002jdl.2,uc002jdm.2,uc002jdn.2_5end | ||
|cluster_id=chr17:61996393..61996421,- | |cluster_id=chr17:61996393..61996421,- | ||
Latest revision as of 18:55, 16 September 2015
| Short description: | p4@CSHL1, p4@GH1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_CSHL1_5end, CAGE_peak_4_at_GH1_5end |
| Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
| Association with transcript: | -195bp_to_ENST00000342364, ENST00000351388, ENST00000392824, NM_000515, NM_022559, NM_022560, NM_022561, NM_022562, uc002jdi.2, uc002jdj.2, uc002jdk.2, uc002jdl.2, uc002jdm.2, uc002jdn.2_5end |
| EntrezGene: | 2688,1444 |
| HGNC: | 2442&submit=Submit 4261, 2442 |
| UniProt: | B1A4G9A6NEF6Q14406B1A4G6P01241B1A4G7B1A4H0 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@CSHL1p4@GH1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pituitary gland | 3.29e-195 | 2 |
| gland of diencephalon | 1.55e-98 | 4 |
| neuroendocrine gland | 1.55e-98 | 4 |
| diencephalon | 4.76e-57 | 7 |
| future diencephalon | 4.76e-57 | 7 |
| endocrine gland | 1.42e-12 | 35 |
| regional part of forebrain | 1.07e-10 | 41 |
| forebrain | 1.07e-10 | 41 |
| anterior neural tube | 1.07e-10 | 41 |
| future forebrain | 1.07e-10 | 41 |
Showing 1 to 10 of 21 entries
