FFCP PHASE1:Hg19::chr10:123779269..123779314,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:123779269..123779314,+ to FFCP PHASE1:Hg19::chr10:123779269..123779314,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10579 | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |HGNC=11523 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000489754_5end | |||
|cluster_id=chr10:123779269..123779314,+ | |||
|coexpression_cluster_id=C2040 | |||
|description=CAGE_peak_10_at_TACC2_5end | |||
|id=chr10:123779269..123779314,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.36e-12!43;CL:0000223!9.38e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.26e-07;2!CL:0001016;2.26e-07;2!CL:0000575;6.88e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.77e-07,2;CL:0001016,2.77e-07,2;CL:0000575,5.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.26e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-18!115;UBERON:0004119!4.32e-16!169;UBERON:0000925!4.32e-16!169;UBERON:0006595!4.32e-16!169;UBERON:0001007!5.86e-16!155;UBERON:0001555!5.86e-16!155;UBERON:0007026!5.86e-16!155;UBERON:0004921!4.11e-15!129;UBERON:0004185!4.11e-15!129;UBERON:0000077!3.30e-11!130;UBERON:0001004!3.63e-11!72;UBERON:0000464!4.73e-11!104;UBERON:0000466!1.65e-09!126;UBERON:0000062!2.22e-09!511;UBERON:0000161!4.24e-09!35;UBERON:0000481!8.07e-09!347;UBERON:0001041!1.83e-08!98;UBERON:0000166!5.77e-08!21;UBERON:0000065!1.18e-07!53;UBERON:0003408!1.40e-07!10;UBERON:0001044!2.15e-07!6;UBERON:0003293!2.15e-07!6;UBERON:0003294!2.15e-07!6;UBERON:0010047!2.15e-07!6;UBERON:0000167!2.15e-07!6;UBERON:0003135!2.31e-07!11;UBERON:0003101!8.41e-07!22;UBERON:0000079!8.41e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.12e-13;6!UBERON:0003293;1.12e-13;6!UBERON:0003294;1.12e-13;6!UBERON:0010047;1.12e-13;6!UBERON:0003408;1.12e-13;6!UBERON:0000167;1.12e-13;6!UBERON:0001041;1.46e-13;14!UBERON:0004921;4.09e-13;33!UBERON:0003135;6.55e-09;11!UBERON:0001829;7.84e-08;2!UBERON:0003127;1.91e-07;2!UBERON:0000341;2.26e-07;2!UBERON:0003101;3.04e-07;22!UBERON:0000079;3.04e-07;22!UBERON:0003296;7.07e-07;4!UBERON:0010133;7.07e-07;4!UBERON:0000153;7.58e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.66e-15,114;UBERON:0003408,8.99e-15,10;UBERON:0001044,9.79e-14,6;UBERON:0003293,9.79e-14,6;UBERON:0003294,9.79e-14,6;UBERON:0010047,9.79e-14,6;UBERON:0000167,9.79e-14,6;UBERON:0004921,1.59e-09,118;UBERON:0001007,4.03e-09,145;UBERON:0001555,4.03e-09,145;UBERON:0007026,4.03e-09,145;UBERON:0000153,6.16e-09,62;UBERON:0007811,6.16e-09,62;UBERON:0003135,7.28e-09,11;UBERON:0000166,3.05e-08,22;UBERON:0002530,5.26e-08,59;UBERON:0001829,7.85e-08,2;UBERON:0004119,1.17e-07,160;UBERON:0000925,1.17e-07,160;UBERON:0006595,1.17e-07,160;UBERON:0001042,1.32e-07,10;UBERON:0009145,1.32e-07,10;UBERON:0003127,1.91e-07,2;UBERON:0000341,2.23e-07,2;UBERON:0003101,3.25e-07,22;UBERON:0000079,3.25e-07,22;UBERON:0001041,5.21e-07,87;UBERON:0000161,5.75e-07,36;UBERON:0006562,7.10e-07,11;UBERON:0001004,9.35e-07,74;UBERON:0003296,9.59e-07,4;UBERON:0010133,9.59e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,2.5500670180478,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.397589304964456,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.439001141634502,0,0,0.185176890317059,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,3.03867263488458,0,0,0,2.70719767744447,0.15403067420883,0.784349769176855,1.46139224653261,0,0,0,0,0,0,0,0.509752546090077,2.49322802678617,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,1.59398390600856,1.65770349318689,0.251932747854276,0,0,0,0.0898683511473268,0.716084698702437,0,0.690503839458535,0,0,0,0,0,0,0,2.17499872630438,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.32681539055697,9.48081461094502,4.07836370070124,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,4.97630965539252,1.14994833854341,3.05515072466813,0,0,0,0.067401132980677,0,0,0,0.782658475728359,0,1.57833761139756,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,1.70765727617876,0,7.63662848674576,0,0,0.34945333648406,0,0,0.146178634172371,0,17.2640449349387,0,4.06765333404958,0,0,0,1.75996244461323,0,0.640358984218058,0,4.03453168031497,0,0,0,0,14.3773361116245,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,4.3929380109778,2.14613024068285,0.669514372325618,0.134366944973453,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,2.0247650239635,45.654315318919,0,11.0693446907758,1.10327990218877,0.577000469484979,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,1.06787412567695,0.628817220398664,1.24271716604159,0,0,0,1.91502377331055,0,0,0,0,2.35581144375351,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,1.258915569475,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0.589848616738702,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,41.6675902811458,7.93937885422871,0,0,1.07140367175657,0.672567444437648,1.21393120847326,2.27662191351298,0,0,0,0,0,0,0.222462803784138,3.9246546425257,0.157115589916002,0.560544326627578,5.47895232305697,0,0,0.857718530119876,0,0,0,0,0,2.7314956335032,9.67763526539729,52.9179651348941,0,0,1.27016115057279,0.4582137370881,0,0,1.78968690876468,0.098150233615243,0.243835849964539,0,1.23195368227496,0,5.34282092365053,0,0,0,0.33883824611688,0,0.301925687133347,0.771741581079447,0.218559560503957,0.940634592723046,0.245148321753905,0.942706188406504,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,2.19100916473955,33.945966971936,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,1.22386595690378,5.07713070004565,1.01084389488329,0,0.227336094654718,0,0,0,9.59552918554414,3.80903090341985,1.67931165573616,2.54506328613017,0,4.9008311874187,9.90374225895274,9.5795369074663,7.52913262387618,10.776328482334,6.02466525298481,6.65320713092027,0,0,0,0,0,0.611207220914332,2.84827324821017,0.665756774185513,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,2.5500670180478,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.397589304964456,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.439001141634502,0,0,0.185176890317059,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,3.03867263488458,0,0,0,2.70719767744447,0.15403067420883,0.784349769176855,1.46139224653261,0,0,0,0,0,0,0,0.509752546090077,2.49322802678617,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,1.59398390600856,1.65770349318689,0.251932747854276,0,0,0,0.0898683511473268,0.716084698702437,0,0.690503839458535,0,0,0,0,0,0,0,2.17499872630438,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.32681539055697,9.48081461094502,4.07836370070124,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,4.97630965539252,1.14994833854341,3.05515072466813,0,0,0,0.067401132980677,0,0,0,0.782658475728359,0,1.57833761139756,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,1.70765727617876,0,7.63662848674576,0,0,0.34945333648406,0,0,0.146178634172371,0,17.2640449349387,0,4.06765333404958,0,0,0,1.75996244461323,0,0.640358984218058,0,4.03453168031497,0,0,0,0,14.3773361116245,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,4.3929380109778,2.14613024068285,0.669514372325618,0.134366944973453,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,2.0247650239635,45.654315318919,0,11.0693446907758,1.10327990218877,0.577000469484979,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,1.06787412567695,0.628817220398664,1.24271716604159,0,0,0,1.91502377331055,0,0,0,0,2.35581144375351,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,1.258915569475,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0.589848616738702,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,41.6675902811458,7.93937885422871,0,0,1.07140367175657,0.672567444437648,1.21393120847326,2.27662191351298,0,0,0,0,0,0,0.222462803784138,3.9246546425257,0.157115589916002,0.560544326627578,5.47895232305697,0,0,0.857718530119876,0,0,0,0,0,2.7314956335032,9.67763526539729,52.9179651348941,0,0,1.27016115057279,0.4582137370881,0,0,1.78968690876468,0.098150233615243,0.243835849964539,0,1.23195368227496,0,5.34282092365053,0,0,0,0.33883824611688,0,0.301925687133347,0.771741581079447,0.218559560503957,0.940634592723046,0.245148321753905,0.942706188406504,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,2.19100916473955,33.945966971936,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,1.22386595690378,5.07713070004565,1.01084389488329,0,0.227336094654718,0,0,0,9.59552918554414,3.80903090341985,1.67931165573616,2.54506328613017,0,4.9008311874187,9.90374225895274,9.5795369074663,7.52913262387618,10.776328482334,6.02466525298481,6.65320713092027,0,0,0,0,0,0.611207220914332,2.84827324821017,0.665756774185513,1.00636896795513,0 | ||
|short_description=p10@TACC2 | |||
}} | }} |
Latest revision as of 19:46, 16 September 2015
Short description: | p10@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TACC2_5end |
Coexpression cluster: | C2040_immature_salivary_parotid_submaxillary_esophagus_glassy_cervical |
Association with transcript: | 6bp_to_ENST00000489754_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.77e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.77e-07 | 2 |
corneal epithelial cell | 5.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.66e-15 | 114 |
gland of gut | 8.99e-15 | 10 |
saliva-secreting gland | 9.79e-14 | 6 |
gland of oral region | 9.79e-14 | 6 |
gland of foregut | 9.79e-14 | 6 |
oral gland | 9.79e-14 | 6 |
oral cavity | 9.79e-14 | 6 |
subdivision of digestive tract | 1.59e-09 | 118 |
digestive system | 4.03e-09 | 145 |
digestive tract | 4.03e-09 | 145 |
primitive gut | 4.03e-09 | 145 |
anterior region of body | 6.16e-09 | 62 |
craniocervical region | 6.16e-09 | 62 |
male reproductive organ | 7.28e-09 | 11 |
oral opening | 3.05e-08 | 22 |
gland | 5.26e-08 | 59 |
major salivary gland | 7.85e-08 | 2 |
endoderm-derived structure | 1.17e-07 | 160 |
endoderm | 1.17e-07 | 160 |
presumptive endoderm | 1.17e-07 | 160 |
chordate pharynx | 1.32e-07 | 10 |
pharyngeal region of foregut | 1.32e-07 | 10 |
open tracheal system trachea | 1.91e-07 | 2 |
throat | 2.23e-07 | 2 |
male organism | 3.25e-07 | 22 |
male reproductive system | 3.25e-07 | 22 |
foregut | 5.21e-07 | 87 |
orifice | 5.75e-07 | 36 |
pharynx | 7.10e-07 | 11 |
respiratory system | 9.35e-07 | 74 |
gland of diencephalon | 9.59e-07 | 4 |
neuroendocrine gland | 9.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.26e-07 | 2 |