FFCP PHASE1:Hg19::chr13:21918947..21918951,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42757 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=32bp_to_ENST00000423575_5end | |||
|cluster_id=chr13:21918947..21918951,- | |||
|coexpression_cluster_id=C2256 | |||
|description=CAGE_peak_1_at_LINC00422_5end | |||
|id=chr13:21918947..21918951,- | |||
|ontology_enrichment_celltype=CL:0000037!1.61e-28!172;CL:0000566!1.61e-28!172;CL:0002032!1.89e-27!165;CL:0000837!1.89e-27!165;CL:0000988!3.37e-26!182;CL:0000084!1.84e-22!25;CL:0000827!1.84e-22!25;CL:0000838!7.80e-16!52;CL:0000542!1.98e-15!53;CL:0000051!1.98e-15!53;CL:0000791!4.19e-15!18;CL:0000789!4.19e-15!18;CL:0002420!4.19e-15!18;CL:0002419!4.19e-15!18;CL:0000790!4.19e-15!18;CL:0000738!3.94e-14!140;CL:0002087!1.53e-13!119;CL:0000763!9.62e-13!112;CL:0000049!9.62e-13!112;CL:0002031!9.76e-12!124;CL:0000625!9.42e-11!11;CL:0000898!1.83e-08!3;CL:0000767!2.30e-08!3;CL:0000134!1.77e-07!358;CL:0002320!4.19e-07!365;CL:0000624!5.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000037;1.25e-11;1!CL:0001024;1.25e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.23e-12,108;CL:0000049,3.23e-12,108;CL:0000037,7.35e-12,168;CL:0001024,1.07e-11,1;CL:0000988,3.80e-11,177;CL:0002032,1.03e-10,161;CL:0000837,1.03e-10,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!6.21e-23!39;DOID:2531!6.39e-20!51;DOID:0060083!6.39e-20!51;DOID:8692!6.37e-17!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.35e-46;31!DOID:1240;6.20e-44;39!DOID:2531;3.79e-27;51!DOID:0060083;3.79e-27;51!DOID:9119;2.77e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.05e-51,39;DOID:8692,3.13e-47,31;DOID:2531,1.81e-38,51;DOID:0060083,1.81e-38,51;DOID:0050686,6.03e-13,137;DOID:9119,2.93e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0.142169232487422,1.46800219667424,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.58030450865046,0.196709770113833,0,0,0,0.32592226663359,0,0,0.557052284425868,0.294605907474837,0.221533894583621,0.541607727530031,0.640456598628376,1.43065282315866,1.15106533222573,1.65810010671509,0.579606171470105,0,0,0,0.113309342697566,0.766440987203842,0.68725489096526,0.506039384039006,0.637130828648193,0.651083453856419,0.950452044448374,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,2.23196781820351,6.78569862871576,2.48956981172077,2.75175657541048,4.54470716384378,5.05434920604226,4.56469358066384,1.41011906195721,7.51903431270201,1.35433422241283,0,0,0.851692475380653,0.343505344755765,0,0,0,2.14926904942244,0,0,0,7.32758329595204,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,1.41282230755522,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867479195013787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@LINC00422 | |||
}} |
Latest revision as of 19:54, 16 September 2015
Short description: | p1@LINC00422 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00422_5end |
Coexpression cluster: | C2256_acute_CD133_CD34_non_chronic_small_CD4 |
Association with transcript: | 32bp_to_ENST00000423575_5end |
EntrezGene: | NA |
HGNC: | 42757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.23e-12 | 108 |
common myeloid progenitor | 3.23e-12 | 108 |
hematopoietic stem cell | 7.35e-12 | 168 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.07e-11 | 1 |
hematopoietic cell | 3.80e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.05e-51 | 39 |
myeloid leukemia | 3.13e-47 | 31 |
hematologic cancer | 1.81e-38 | 51 |
immune system cancer | 1.81e-38 | 51 |
organ system cancer | 6.03e-13 | 137 |
acute myeloid leukemia | 2.93e-12 | 1 |