FFCP PHASE1:Hg19::chr11:134201871..134201910,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:134201871..134201910,+ to FFCP PHASE1:Hg19::chr11:134201871..134201910,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89944 | |EntrezGene=89944 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25129 | |HGNC=25129 | ||
|TSSclassifier=strong | |||
|UniProt=E9PI81 | |UniProt=E9PI81 | ||
|association_with_transcript=9bp_to_ENST00000534718_5end | |||
|cluster_id=chr11:134201871..134201910,+ | |||
|description=CAGE_peak_1_at_GLB1L2_5end | |||
|id=chr11:134201871..134201910,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.66e-13!254;CL:0002076!8.63e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.63e-07;10!CL:1000494;1.63e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.27e-14,253;CL:1000507,1.07e-07,10;CL:1000494,1.07e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.02e-13!143;DOID:162!3.41e-11!235;DOID:299!4.03e-11!25;DOID:14566!1.07e-10!239;DOID:305!2.16e-10!106;DOID:3119!4.38e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;4.28e-13;25!DOID:3119;3.20e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.15e-17,235;DOID:14566,1.59e-16,239;DOID:0050687,3.03e-16,143;DOID:305,2.50e-13,106;DOID:299,5.74e-13,25;DOID:3119,4.46e-09,14;DOID:0050686,8.26e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-11!115;UBERON:0002346!8.23e-11!90;UBERON:0000073!4.73e-10!94;UBERON:0001016!4.73e-10!94;UBERON:0000924!1.28e-09!173;UBERON:0006601!1.28e-09!173;UBERON:0003075!3.24e-09!86;UBERON:0007284!3.24e-09!86;UBERON:0003056!4.14e-09!61;UBERON:0005743!1.04e-08!86;UBERON:0004121!2.24e-08!169;UBERON:0005409!4.11e-08!35;UBERON:0000464!5.65e-08!104;UBERON:0005177!7.90e-08!107;UBERON:0000153!2.20e-07!129;UBERON:0007811!2.20e-07!129;UBERON:0001017!4.25e-07!82;UBERON:0004921!6.38e-07!129;UBERON:0004185!6.38e-07!129;UBERON:0000033!6.93e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.56e-08;30!UBERON:0001008;5.56e-08;30!UBERON:0002113;1.08e-07;24!UBERON:0011143;1.08e-07;24!UBERON:0004211;1.63e-07;10!UBERON:0009773;1.63e-07;10!UBERON:0001231;1.63e-07;10!UBERON:0004810;1.63e-07;10!UBERON:0005409;9.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.11e-11,101;UBERON:0002113,7.28e-09,26;UBERON:0003918,7.28e-09,26;UBERON:0011143,7.28e-09,26;UBERON:0005095,7.28e-09,26;UBERON:0007687,7.28e-09,26;UBERON:0004810,1.07e-07,10;UBERON:0000489,3.02e-07,31;UBERON:0011216,9.16e-07,223 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.737201809504527,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,2.33930010345897,0.612002073732759,2.5076377718247,3.14859585844162,2.73748850145768,4.2684497462233,0,0,0,0,0.767658796194425,0.309632246632152,2.75826367343678,3.0120591877825,1.84877005083394,0,0,0.587200878669695,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.786839080455332,0.393010762749165,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0.276350017785848,0,0.296573126324121,0.535081656179426,0,1.35971211237079,0,0.34362744548263,0,0.637130828648193,1.30216690771284,0,0.451725357233318,0.383959833463255,1.24930726552346,0.710331756132051,0.821127996921047,0.403213486449465,0.802320587350522,1.44824403882799,0,0,0.511450247374121,0,0,0.289693037921647,0,0,2.45790524626576,0.665188192387692,1.75669571386252,6.67993285038334,6.9216104775583,4.82019775619758,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,1.89853131913626,0.183201743930407,0,0,4.79703457356788,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.454072282934794,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818238361772504,1.43402297694502,0.853815942907168,0.265059536642971,0.813357600086629,1.24393266018445,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,1.47008711385542,0,0,0,0.882926198829301,5.04252598026766,1.02940686179115,0.878002283269004,3.37205259772859,1.80952150340936,1.48141512253647,0,0,0,3.24605133930215,0.821860859650752,0.288732895522148,0.462985512576611,0.190254152234598,4.74122638775565,3.43394464837949,0,0,0,0,0,0.567100388969546,1.07470227243418,0.871901815541886,0.766765358330422,0,0,0,0,0.12624243342638,4.19086102328316,6.49380323449072,4.68869788840188,0,4.01027221542962,3.60411669412701,1.71495859578347,0.336393253036082,0,0.22001485746285,0,0,1.690605505112,0,0,0,0,0,0.57191197463259,0,0,1.62868092146868,0.355391948742546,0.791951872933429,1.20575750823834,0.871533458600294,4.1988656296464,0,0,0,0,0,0,0,0,0,4.03506518376698,1.18218456121156,1.72502059887614,1.79680250791648,0.254094624222463,0,0.773288812777695,2.34522771468088,1.27587750330633,0,0,0.414415513436035,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.173767228936166,0.391602314925481,0,0.413536052245775,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0,0,0,5.31781578203138,0.40101294060657,0.368323955743585,0,0,0.131124414959424,9.02399225814824,5.77615028283111,10.1965469992991,2.92278449306521,4.3276167846079,0,0,0,0,1.62567862526312,5.51858751240339,4.58777291481069,4.98645605357235,3.58199607555485,0,0,7.69350375349168,13.4486004736879,18.221190101201,1.03041011647722,0,0,0.574265537996172,0,0,0.386682873168488,0.308097234229289,0.307007349452259,0,0,0.145016693914229,0.340906509664404,0.178064071293475,0.661139661443912,0.960950336825531,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0,0.143411352204052,0.392996164052485,0,0,0,0,1.13841952129715,0,1.05844323998063,4.69211592875051,0,0.847294206991012,1.29151611801369,3.36942951335251,1.7737206141467,0.229723400206959,0,0,0.569647187174163,0.476463550915578,0,0,0,0,2.7774258493143,0.962479855263359,13.2321716629757,1.67222857613147,0,0,9.2467238182717,0,0,0.211673582723883,0,0,0,0,0,0,0,1.00899853595524,4.25846237690326,0,0,0,0,0,0,0,0,0,0,16.4683675559233,0.439524537815682,2.54857095673978,0,14.4909434871271,0,1.78178808499583,0,1.9882952955326,0.703347082052564,0,5.27372397525631,12.0341482632956,1.19548792950642,3.31540698637377,8.06184793133683,0,0,0,10.2449920307953,0.358042349351218,1.53471711068062,3.45251919729268,0,0,0.969332746095218,1.11321717794222,1.99613798001194,2.60427761085233,0,0.724999575434793,28.4483620713749,7.88186315907576,9.69189495248539,23.0978060071781,5.24888304089858,11.8064996554639,2.65722415744152,3.13550740426061,0,0,0.295547618953547,3.07139556015562,2.28770773389879,2.23077990845765,3.77056266668606,0,0.69169171316418,1.70539524378567,4.99777910841237,4.14701507651495,0.274792780205587,1.06606955203727,2.04386596391473,1.72678282034527,0.166211681900156,3.38393490925771,6.4700636324854,5.03464760927528,10.4364552998302,3.49660473756833,0,20.2408682117343,3.1097675715467,8.43915694994155,21.8957624837271,5.04208117669033,1.83309043480088,0.593042257361244,1.23563938946503,0.522109747527277,3.37005664903385,0,0.937057782901357,0,6.65259704369105,2.42780379534093,5.12959723704208,0,0.61214552326098,1.64285107034069,4.50970258243478,7.98399073758803,10.634461963315,4.63388738225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| ||
|short_description=p1@GLB1L2 | |||
}} | }} |
Latest revision as of 20:36, 16 September 2015
Short description: | p1@GLB1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLB1L2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000534718_5end |
EntrezGene: | GLB1L2 |
HGNC: | 25129 |
UniProt: | E9PI81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.27e-14 | 253 |
kidney tubule cell | 1.07e-07 | 10 |
nephron tubule epithelial cell | 1.07e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.11e-11 | 101 |
kidney | 7.28e-09 | 26 |
kidney mesenchyme | 7.28e-09 | 26 |
upper urinary tract | 7.28e-09 | 26 |
kidney rudiment | 7.28e-09 | 26 |
kidney field | 7.28e-09 | 26 |
nephron tubule epithelium | 1.07e-07 | 10 |
cavitated compound organ | 3.02e-07 | 31 |
organ system subdivision | 9.16e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.15e-17 | 235 |
disease of cellular proliferation | 1.59e-16 | 239 |
cell type cancer | 3.03e-16 | 143 |
carcinoma | 2.50e-13 | 106 |
adenocarcinoma | 5.74e-13 | 25 |
gastrointestinal system cancer | 4.46e-09 | 14 |
organ system cancer | 8.26e-09 | 137 |