FFCP PHASE1:Hg19::chr13:24044226..24044237,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=42009 | |HGNC=42009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000443778_5end | |association_with_transcript=40bp_to_ENST00000443778_5end | ||
|cluster_id=chr13:24044226..24044237,+ | |||
|description=CAGE_peak_1_at_LINC00327_5end | |description=CAGE_peak_1_at_LINC00327_5end | ||
|id=chr13:24044226..24044237,+ | |id=chr13:24044226..24044237,+ | ||
|ontology_enrichment_celltype=CL:0002620!3.11e-61!23;CL:0000057!1.59e-22!75;CL:0002551!7.22e-15!6;CL:0000055!3.62e-08!180 | |ontology_enrichment_celltype=CL:0002620!3.11e-61!23;CL:0000057!1.59e-22!75;CL:0002551!7.22e-15!6;CL:0000055!3.62e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.84e-68;23!CL:0000057;1.08e-09;73!CL:0000047;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.73e-68,23;CL:0000057,5.68e-20,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.25e-20!5;DOID:450!6.25e-20!5;DOID:66!6.25e-20!5;DOID:423!6.25e-20!5;DOID:0080000!6.25e-20!5;DOID:11722!6.25e-20!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.44e-66;5!DOID:450;4.44e-66;5!DOID:66;4.44e-66;5!DOID:423;4.44e-66;5!DOID:0080000;4.44e-66;5!DOID:11722;4.44e-66;5!DOID:2513;1.97e-14;1!DOID:3451;7.27e-08;2!DOID:4159;7.27e-08;2!DOID:0060122;7.27e-08;2!DOID:7;1.95e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.23e-66,5;DOID:450,6.23e-66,5;DOID:66,6.23e-66,5;DOID:423,6.23e-66,5;DOID:0080000,6.23e-66,5;DOID:11722,6.23e-66,5;DOID:2513,1.23e-14,1;DOID:7,1.71e-08,39;DOID:3451,5.74e-08,2;DOID:4159,5.74e-08,2;DOID:0060122,5.74e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.62e-48!40;UBERON:0002199!4.25e-46!45;UBERON:0002416!4.25e-46!45;UBERON:0003102!7.06e-24!95;UBERON:0002067!4.44e-14!9;UBERON:0004016!4.44e-14!9;UBERON:0010083!4.44e-14!9 | |ontology_enrichment_uberon=UBERON:0002097!1.62e-48!40;UBERON:0002199!4.25e-46!45;UBERON:0002416!4.25e-46!45;UBERON:0003102!7.06e-24!95;UBERON:0002067!4.44e-14!9;UBERON:0004016!4.44e-14!9;UBERON:0010083!4.44e-14!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.14e-42;41!UBERON:0002199;8.27e-32;46!UBERON:0002416;8.27e-32;46!UBERON:0003102;2.46e-25;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.92e-53,41;UBERON:0002199,3.14e-47,46;UBERON:0002416,3.14e-47,46;UBERON:0003102,2.99e-21,99 | |||
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| ||
|short_description=p1@LINC00327 | |short_description=p1@LINC00327 | ||
}} | }} |
Latest revision as of 20:49, 16 September 2015
Short description: | p1@LINC00327 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00327_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000443778_5end |
EntrezGene: | NA |
HGNC: | 42009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.73e-68 | 23 |
fibroblast | 5.68e-20 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.92e-53 | 41 |
integument | 3.14e-47 | 46 |
integumental system | 3.14e-47 | 46 |
surface structure | 2.99e-21 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.23e-66 | 5 |
myotonic disease | 6.23e-66 | 5 |
muscle tissue disease | 6.23e-66 | 5 |
myopathy | 6.23e-66 | 5 |
muscular disease | 6.23e-66 | 5 |
myotonic dystrophy | 6.23e-66 | 5 |
basal cell carcinoma | 1.23e-14 | 1 |
disease of anatomical entity | 1.71e-08 | 39 |
skin carcinoma | 5.74e-08 | 2 |
skin cancer | 5.74e-08 | 2 |
integumentary system cancer | 5.74e-08 | 2 |