FFCP PHASE1:Hg19::chr2:30670193..30670200,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253558 | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26756 | |HGNC=26756 | ||
|TSSclassifier=strong | |||
|UniProt=C9K0C3 | |UniProt=C9K0C3 | ||
|association_with_transcript=51bp_to_ENST00000476038_5end | |association_with_transcript=51bp_to_ENST00000476038_5end | ||
|cluster_id=chr2:30670193..30670200,+ | |||
|coexpression_cluster_id=C102 | |coexpression_cluster_id=C102 | ||
|description=CAGE_peak_5_at_LCLAT1_5end | |description=CAGE_peak_5_at_LCLAT1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;2.28e-10;1 | |ontology_enrichment_celltype_v019=CL:0002581;2.28e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.57e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.46e-13;3 | |ontology_enrichment_development_v019=UBERON:0006215;5.46e-13;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.28e-10;1!DOID:0060061;2.28e-10;1!DOID:8691;2.28e-10;1 | |ontology_enrichment_disease_v019=DOID:0060060;2.28e-10;1!DOID:0060061;2.28e-10;1!DOID:8691;2.28e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.73e-10,1;DOID:0060061,1.73e-10,1;DOID:8691,1.73e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.38e-09!94;UBERON:0001016!3.38e-09!94;UBERON:0001017!1.10e-07!82;UBERON:0001049!1.26e-07!57;UBERON:0005068!1.26e-07!57;UBERON:0006241!1.26e-07!57;UBERON:0007135!1.26e-07!57;UBERON:0005743!1.97e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!3.38e-09!94;UBERON:0001016!3.38e-09!94;UBERON:0001017!1.10e-07!82;UBERON:0001049!1.26e-07!57;UBERON:0005068!1.26e-07!57;UBERON:0006241!1.26e-07!57;UBERON:0007135!1.26e-07!57;UBERON:0005743!1.97e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.28e-10;1!UBERON:0003831;2.28e-10;1!UBERON:0003898;2.28e-10;1!UBERON:0004830;2.28e-10;1!UBERON:0003830;2.28e-10;1!UBERON:0005175;2.28e-10;1!UBERON:0001774;2.28e-10;1!UBERON:0001103;2.28e-10;1!UBERON:0002331;6.31e-09;10!UBERON:0004733;2.58e-07;12!UBERON:0002028;2.58e-07;12!UBERON:0002037;6.28e-07;6!UBERON:0004732;8.70e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0002426;2.28e-10;1!UBERON:0003831;2.28e-10;1!UBERON:0003898;2.28e-10;1!UBERON:0004830;2.28e-10;1!UBERON:0003830;2.28e-10;1!UBERON:0005175;2.28e-10;1!UBERON:0001774;2.28e-10;1!UBERON:0001103;2.28e-10;1!UBERON:0002331;6.31e-09;10!UBERON:0004733;2.58e-07;12!UBERON:0002028;2.58e-07;12!UBERON:0002037;6.28e-07;6!UBERON:0004732;8.70e-07;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.30e-10,1;UBERON:0003831,1.30e-10,1;UBERON:0003898,1.30e-10,1;UBERON:0004830,1.30e-10,1;UBERON:0003830,1.30e-10,1;UBERON:0005175,1.30e-10,1;UBERON:0001774,1.30e-10,1;UBERON:0001103,1.30e-10,1;UBERON:0010084,1.30e-10,1;UBERON:0002331,5.38e-09,10;UBERON:0000358,5.38e-09,10;UBERON:0000307,5.38e-09,10;UBERON:0000091,5.38e-09,10;UBERON:0000087,5.38e-09,10;UBERON:0007010,5.38e-09,10;UBERON:0007806,5.38e-09,10;UBERON:0008780,5.38e-09,10;UBERON:0005728,5.38e-09,10;UBERON:0004733,2.76e-07,12;UBERON:0002028,2.76e-07,12;UBERON:0007277,2.76e-07,12;UBERON:0002037,5.93e-07,6;UBERON:0006215,5.93e-07,6;UBERON:0004732,9.25e-07,13 | |||
|phase1_expression=0,0.642301571672949,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0.382067028739756,0.0821005894499457,0.157421562627358,0.393364276848904,0,0.154816123316076,0,0,0,0.387336002901508,0,0,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0,0,1.94826728407911,0,0,0.221533894583621,0,0.25618263945135,0,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.226618685395132,0,1.37450978193052,0,0,0,0.950452044448374,1.05402583354441,0.383959833463255,0,0.473554504088034,0,0,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0,0.392937226493138,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0.25326102332916,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0.448346041655403,0.352303495931295,0.323745888736263,0.140450806702248,0.408308342509787,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.89694817844431,0.640672166455702,0.423863802319124,0.300091096084402,0.721367704669072,0.772921620136887,0.558350568994769,2.86919764810153,0.974370051611986,0,0.368199594569197,0.161646056818812,0.355009592516614,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,2.46331618947972,0.264145302039678,0.207328115540772,0.144119953416961,0.12624243342638,0.63497894292169,0,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0.5867062865676,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0.215627574859517,0.256686072559497,0.76228387266739,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0.414415513436035,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.260650843404249,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0.744323423456331,0.306923946576125,0,0.384417447767103,0.511707249066704,0,1.48418066444991,0.154209693802656,0,0.246381468041427,0,0,0.241718899183244,0,0.276242966807689,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0.54941678891006,0.330037999682352,1.14853107599234,0.650060246036521,0,0.290012154876366,0.308097234229289,0,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0.282810863907425,0,0,1.32687795048244,0,0,0,0.405820753925408,0,0,0.286822704408103,0.196498082026242,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0.288666338176536,0,1.08890984861323,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0.427296284509893,0,0.735120647943095,0.185803175125719,0.144269212976445,0.284567373393656,0,0.997896857164083,0.383010740264733,0.423347165447766,0.324621940274555,0,0,0.313359791546046,0,0.338583555603207,0.1605880751037,0.605399121573143,0,0,0,0,0.333698283423817,0.390776190804081,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.222886768554957,0,0,0,0.307160702099232,0.994147647766298,0.281338832821026,0.111308705022906,0.16480387422676,0.422250816255987,0,0,0,0.306806047506464,0.123084805461069,0.311039587661807,0.449341755736634,0,0.511572370226872,0.0986434056369336,0,0,0,0.463840490809256,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0,0.347249989866585,0.885741385813839,0.241192877250816,1.52581736317083,0.221158519862449,1.18219047581419,0.219385397153973,0.32681539055697,0.557694977114413,0,0.227884111694002,0,0,0,0,0.274792780205587,0,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0.37950746544837,0.476809736941136,0.421996129056054,0.489698424477443,0.282706142867882,0,0,0.176915129006678,0,2.372169029444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| ||
|short_description=p5@LCLAT1 | |short_description=p5@LCLAT1 | ||
}} | }} |
Latest revision as of 22:04, 16 September 2015
Short description: | p5@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCLAT1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 51bp_to_ENST00000476038_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | C9K0C3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.57e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.30e-10 | 1 |
respiratory system muscle | 1.30e-10 | 1 |
skeletal muscle of trunk | 1.30e-10 | 1 |
respiratory system skeletal muscle | 1.30e-10 | 1 |
thoracic segment muscle | 1.30e-10 | 1 |
chest organ | 1.30e-10 | 1 |
muscle of trunk | 1.30e-10 | 1 |
diaphragm | 1.30e-10 | 1 |
future diaphragm | 1.30e-10 | 1 |
umbilical cord | 5.38e-09 | 10 |
blastocyst | 5.38e-09 | 10 |
blastula | 5.38e-09 | 10 |
bilaminar disc | 5.38e-09 | 10 |
inner cell mass | 5.38e-09 | 10 |
cleaving embryo | 5.38e-09 | 10 |
connecting stalk | 5.38e-09 | 10 |
inner cell mass derived epiblast | 5.38e-09 | 10 |
extraembryonic mesoderm | 5.38e-09 | 10 |
segmental subdivision of hindbrain | 2.76e-07 | 12 |
hindbrain | 2.76e-07 | 12 |
presumptive hindbrain | 2.76e-07 | 12 |
cerebellum | 5.93e-07 | 6 |
rhombic lip | 5.93e-07 | 6 |
segmental subdivision of nervous system | 9.25e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.73e-10 | 1 |
cutaneous T cell lymphoma | 1.73e-10 | 1 |
mycosis fungoides | 1.73e-10 | 1 |