FFCP PHASE1:Hg19::chr2:30864391..30864426,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:30864391..30864426,+ to FFCP PHASE1:Hg19::chr2:30864391..30864426,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253558 | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26756 | |HGNC=26756 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_AK023269_5end | |||
|cluster_id=chr2:30864391..30864426,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_6_at_LCLAT1_5end | |||
|id=chr2:30864391..30864426,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.53e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000511;9.12e-14;1!CL:0002625;9.12e-14;1!CL:0002553;9.12e-14;1!CL:0000216;9.12e-14;1!CL:0002253;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.53e-14,1;CL:0002625,4.53e-14,1;CL:0000216,4.53e-14,1;CL:0002553,5.15e-14,1;CL:0002253,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.34e-16!239;DOID:162!1.12e-15!235;DOID:0050687!1.81e-13!143;DOID:305!4.96e-11!106;DOID:7!2.88e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;9.12e-14;1!UBERON:0001343;9.12e-14;1!UBERON:0004910;9.12e-14;1!UBERON:0004813;9.12e-14;1!UBERON:0004909;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.53e-14,1;UBERON:0001343,4.53e-14,1;UBERON:0004910,4.53e-14,1;UBERON:0005154,4.53e-14,1;UBERON:0005295,4.53e-14,1;UBERON:0004813,4.53e-14,1;UBERON:0005297,4.53e-14,1;UBERON:0005294,4.53e-14,1;UBERON:0010141,4.53e-14,1;UBERON:0005891,4.53e-14,1;UBERON:0004909,1.12e-07,2 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,2.00146596706261,0.446961094427288,0,0,1.26343974685366,0,0,0,0.218441372130172,0,0.247532705920093,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0.328402357799783,0.314843125254717,0,0,0,0.919421224478927,0,0,0.154934401160603,0.284338464974843,0,0,0,0,0.223915474239924,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0.289693037921647,0,0,0.378139268656271,0,0,0.0654895377488563,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.735326160691737,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0.741800787835671,0,0,0,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0,0,0.427114777637135,0.211931901159562,0,0.412210116953756,0,0.18611685633159,1.35021065793013,0.487185025805993,0,0,0.161646056818812,1.06502877754984,0.10075209822764,0,0.193260853163297,0,0.573609190778008,0.121973706129595,0,0.232387885739037,0.10366105501537,0.504641701751257,0,0,0,0,0.928735856063958,0,0,0.674338760312407,0.482022059766964,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.439001141634502,0,0,0.462942225792648,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.447792613514241,0.290633938513962,0.383382679165211,0,0.176096868026452,0,0.144119953416961,0,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0,0.571652865261156,0,0,0.2933531432838,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.49076596687656,0,0.271265023699736,0,0.892144943985809,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0,0.256278298511402,0,0.160853921143607,0,0,0,0.410635780069046,0,0.232420756919918,0.362578348774867,0.601519410909855,0.184161977871793,0.34444334449382,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0.27470839445503,0.577566499444116,0,0.650060246036521,1.6068392984416,0.193341436584244,0.308097234229289,0,0.413509717453592,0.214840489736547,0.145016693914229,0.170453254832202,0.178064071293475,0.495854746082934,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0.658589785919804,0.379473173765715,0,0.384888450902048,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0.929015875628594,0.432807638929335,0.284567373393656,0.637705090915289,0.798317485731266,0,0.423347165447766,0.649243880549111,0,0.228234679033192,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.667852230137435,0.494411622680279,0,0.19924798825107,0,0,0,0.123084805461069,0.311039587661807,0.359473404589307,0.716084698702437,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.349839999984783,0,0.1137934482855,0.254253650292766,0,0.689486746482929,0.583209226766509,0,0,0.120596438625408,0,0,0,0,0.435753854075961,0.278847488557207,0.230850775511391,0.227884111694002,0.46112780877612,0.269272933229316,0,0.31900115973192,0.183195186803725,0,0,0.31396051279005,0,0.225595660617181,0.588187602953219,0,0.37950746544837,0,0,0.489698424477443,0.848118428603645,1.08194319871046,0,0.0884575645033392,1.22206028986725,0.593042257361244,0.370691816839509,0.417687798021821,0,0,0,0.182454789215666,0,0.728341138602278,0,0,0,0,0.300646838828985,0.311064574191741,0,0.330991955875499,0.313932918407225,0,0,0.277349346026277,0,0.489961987071888,0.34823682632161,0,0.343972064943233,0.290268993867255,0.511625219603299,0.656923656425674,0.193978032976839,0,0.225980740780532,0.274083849293502,0.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| ||
|short_description=p6@LCLAT1 | |||
}} | }} |
Latest revision as of 22:14, 16 September 2015
Short description: | p6@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LCLAT1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -46bp_to_AK023269_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.53e-14 | 1 |
seminiferous tubule epithelial cell | 4.53e-14 | 1 |
Sertoli cell | 4.53e-14 | 1 |
lung fibroblast | 5.15e-14 | 1 |
epithelial cell of large intestine | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.53e-14 | 1 |
seminiferous tubule of testis | 4.53e-14 | 1 |
epithelium of male gonad | 4.53e-14 | 1 |
epithelial cord | 4.53e-14 | 1 |
sex cord | 4.53e-14 | 1 |
seminiferous tubule epithelium | 4.53e-14 | 1 |
testis sex cord | 4.53e-14 | 1 |
genital ridge | 4.53e-14 | 1 |
primitive sex cord of indifferent gonad | 4.53e-14 | 1 |
coelomic epithelium | 4.53e-14 | 1 |
epithelium of gonad | 1.12e-07 | 2 |