FFCP PHASE1:Hg19::chr13:27825706..27825741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6144 | |EntrezGene=6144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10313 | |HGNC=10313 | ||
|TSSclassifier=strong | |||
|UniProt=P46778 | |UniProt=P46778 | ||
|association_with_transcript=0bp_to_ENST00000272274,ENST00000319826,ENST00000326092_5end | |association_with_transcript=0bp_to_ENST00000272274,ENST00000319826,ENST00000326092_5end | ||
|cluster_id=chr13:27825706..27825741,+ | |||
|description=CAGE_peak_1_at_RPL21_5end | |description=CAGE_peak_1_at_RPL21_5end | ||
|id=chr13:27825706..27825741,+ | |id=chr13:27825706..27825741,+ | ||
|ontology_enrichment_celltype=CL:0000012!2.19e-21!682;CL:0000548!3.37e-20!679;CL:0000004!3.37e-20!679;CL:0000255!3.37e-20!679;CL:0000144!9.95e-18!625;CL:0000003!3.10e-16!722;CL:0002321!1.26e-15!248;CL:0000220!6.56e-15!246;CL:0002371!5.31e-13!591;CL:0000183!1.80e-09!59;CL:0000393!2.10e-09!60;CL:0000211!2.10e-09!60;CL:0000066!8.95e-09!254;CL:0000187!6.44e-08!54;CL:0000680!8.26e-08!57;CL:0000056!8.26e-08!57;CL:0000355!8.26e-08!57;CL:0000055!1.04e-07!180;CL:0000222!4.20e-07!119 | |ontology_enrichment_celltype=CL:0000012!2.19e-21!682;CL:0000548!3.37e-20!679;CL:0000004!3.37e-20!679;CL:0000255!3.37e-20!679;CL:0000144!9.95e-18!625;CL:0000003!3.10e-16!722;CL:0002321!1.26e-15!248;CL:0000220!6.56e-15!246;CL:0002371!5.31e-13!591;CL:0000183!1.80e-09!59;CL:0000393!2.10e-09!60;CL:0000211!2.10e-09!60;CL:0000066!8.95e-09!254;CL:0000187!6.44e-08!54;CL:0000680!8.26e-08!57;CL:0000056!8.26e-08!57;CL:0000355!8.26e-08!57;CL:0000055!1.04e-07!180;CL:0000222!4.20e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.88e-16,250;CL:0000393,2.56e-09,61;CL:0000211,2.56e-09,61;CL:0000066,8.95e-09,253;CL:0000187,7.69e-08,55;CL:0000680,9.71e-08,58;CL:0000056,9.71e-08,58;CL:0000355,9.71e-08,58;CL:0000222,2.65e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.89e-12!51;DOID:0060083!3.89e-12!51;DOID:1240!4.10e-09!39;DOID:8692!1.01e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.41e-07;31!DOID:2531;1.43e-07;51!DOID:0060083;1.43e-07;51!DOID:1240;1.57e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.89e-12,51;DOID:0060083,3.89e-12,51;DOID:1240,4.10e-09,39;DOID:8692,1.01e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.83e-07!143;UBERON:0000490!9.10e-07!138 | |ontology_enrichment_uberon=UBERON:0005256!1.83e-07!143;UBERON:0000490!9.10e-07!138 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.04e-08,78;UBERON:0000490,5.53e-07,148 | |||
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209489,27.2483218457748 | ||
|short_description=p1@RPL21 | |short_description=p1@RPL21 | ||
}} | }} | ||
Latest revision as of 22:51, 16 September 2015
| Short description: | p1@RPL21 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RPL21_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000272274, ENST00000319826, ENST00000326092_5end |
| EntrezGene: | RPL21 |
| HGNC: | 10313 |
| UniProt: | P46778 |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 6.88e-16 | 250 |
| electrically responsive cell | 2.56e-09 | 61 |
| electrically active cell | 2.56e-09 | 61 |
| epithelial cell | 8.95e-09 | 253 |
| muscle cell | 7.69e-08 | 55 |
| muscle precursor cell | 9.71e-08 | 58 |
| myoblast | 9.71e-08 | 58 |
| multi-potent skeletal muscle stem cell | 9.71e-08 | 58 |
| mesodermal cell | 2.65e-07 | 121 |
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 5.04e-08 | 78 |
| unilaminar epithelium | 5.53e-07 | 148 |
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 3.89e-12 | 51 |
| immune system cancer | 3.89e-12 | 51 |
| leukemia | 4.10e-09 | 39 |
| myeloid leukemia | 1.01e-07 | 31 |