FFCP PHASE1:Hg19::chr12:123187512..123187523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338442 | |EntrezGene=338442 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24827 | |HGNC=24827 | ||
|TSSclassifier=strong | |||
|UniProt=A8K4F0 | |UniProt=A8K4F0 | ||
|association_with_transcript=319bp_to_AK290915_5end | |association_with_transcript=319bp_to_AK290915_5end | ||
|cluster_id=chr12:123187512..123187523,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_2_at_HCAR2_5end | |description=CAGE_peak_2_at_HCAR2_5end | ||
|id=chr12:123187512..123187523,- | |id=chr12:123187512..123187523,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0001014!1.45e-15!2;CL:0001016!1.45e-15!2;CL:0002057!3.14e-15!42;CL:0000860!4.18e-14!45;CL:0002009!2.39e-13!65;CL:0000557!4.68e-12!71;CL:0002194!1.97e-09!63;CL:0000576!1.97e-09!63;CL:0000040!1.97e-09!63;CL:0000559!1.97e-09!63;CL:0000839!2.43e-08!70;CL:0000766!1.45e-07!76;CL:0000763!6.53e-07!112;CL:0000049!6.53e-07!112;CL:0000453!9.70e-07!5 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:3151;7.05e-34;1!DOID:3149;7.05e-34;1!DOID:3451;1.07e-17;2!DOID:4159;1.07e-17;2!DOID:0060122;1.07e-17;2 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002372;3.05e-34;1!UBERON:0001961;3.05e-34;1!UBERON:0001744;3.05e-34;1!UBERON:0001042;3.05e-34;1!UBERON:0001735;3.05e-34;1!UBERON:0000341;7.05e-18;2!UBERON:0006562;7.05e-18;2!UBERON:0001723;1.85e-12;3!UBERON:0001033;1.85e-12;3!UBERON:0001043;2.89e-12;3!UBERON:0000014;1.57e-09;4!UBERON:0000974;7.80e-07;6 | |ontology_enrichment_development_v019=UBERON:0009143;7.05e-34;1!UBERON:0008814;5.48e-18;2!UBERON:0010056;5.48e-18;2 | ||
|ontology_enrichment_disease=DOID:3151!8.15e-09!1;DOID:3149!8.15e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;7.05e-34;1!DOID:3149;7.05e-34;1!DOID:3451;1.07e-17;2!DOID:4159;1.07e-17;2!DOID:0060122;1.07e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.85e-34,1;DOID:3149,9.85e-34,1;DOID:3451,1.27e-17,2;DOID:4159,1.27e-17,2;DOID:0060122,1.27e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0001723!6.47e-11!3;UBERON:0001033!6.47e-11!3;UBERON:0010056!6.47e-11!3;UBERON:0002371!1.77e-10!80;UBERON:0001474!1.31e-09!86;UBERON:0002372!6.50e-09!1;UBERON:0001961!6.50e-09!1;UBERON:0001744!6.50e-09!1;UBERON:0001735!6.50e-09!1;UBERON:0001043!2.13e-08!4;UBERON:0009143!2.13e-08!4;UBERON:0000997!2.29e-08!1;UBERON:0005056!2.29e-08!1;UBERON:0002193!2.82e-08!112;UBERON:0006834!3.79e-08!1;UBERON:0002405!5.32e-08!115;UBERON:0004765!6.98e-08!101;UBERON:0001434!6.98e-08!101;UBERON:0002390!8.73e-08!102;UBERON:0003061!8.73e-08!102;UBERON:0001042!2.86e-07!10;UBERON:0009145!2.86e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.05e-34;1!UBERON:0001961;3.05e-34;1!UBERON:0001744;3.05e-34;1!UBERON:0001042;3.05e-34;1!UBERON:0001735;3.05e-34;1!UBERON:0000341;7.05e-18;2!UBERON:0006562;7.05e-18;2!UBERON:0001723;1.85e-12;3!UBERON:0001033;1.85e-12;3!UBERON:0001043;2.89e-12;3!UBERON:0000014;1.57e-09;4!UBERON:0000974;7.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.61e-34,1;UBERON:0001961,3.61e-34,1;UBERON:0001744,3.61e-34,1;UBERON:0001735,3.61e-34,1;UBERON:0000341,6.48e-18,2;UBERON:0001042,2.66e-14,10;UBERON:0009145,2.66e-14,10;UBERON:0006562,4.25e-13,11;UBERON:0001723,1.85e-12,3;UBERON:0001033,1.85e-12,3;UBERON:0010056,1.85e-12,3;UBERON:0001043,2.59e-12,3;UBERON:0009143,2.59e-12,3;UBERON:0000014,1.70e-09,4;UBERON:0001557,5.35e-08,19;UBERON:0000166,4.94e-07,22 | |||
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|short_description=p2@HCAR2 | |short_description=p2@HCAR2 | ||
}} | }} |
Latest revision as of 00:26, 17 September 2015
Short description: | p2@HCAR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HCAR2_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 319bp_to_AK290915_5end |
EntrezGene: | HCAR2 |
HGNC: | 24827 |
UniProt: | A8K4F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 3.61e-34 | 1 |
mucosa-associated lymphoid tissue | 3.61e-34 | 1 |
lymphoid tissue | 3.61e-34 | 1 |
tonsillar ring | 3.61e-34 | 1 |
throat | 6.48e-18 | 2 |
chordate pharynx | 2.66e-14 | 10 |
pharyngeal region of foregut | 2.66e-14 | 10 |
pharynx | 4.25e-13 | 11 |
tongue | 1.85e-12 | 3 |
gustatory system | 1.85e-12 | 3 |
future tongue | 1.85e-12 | 3 |
esophagus | 2.59e-12 | 3 |
esophageal region | 2.59e-12 | 3 |
zone of skin | 1.70e-09 | 4 |
upper respiratory tract | 5.35e-08 | 19 |
oral opening | 4.94e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.85e-34 | 1 |
keratoacanthoma | 9.85e-34 | 1 |
skin carcinoma | 1.27e-17 | 2 |
skin cancer | 1.27e-17 | 2 |
integumentary system cancer | 1.27e-17 | 2 |