FFCP PHASE1:Hg19::chr2:36776156..36776185,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2359 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=115bp_to_BC026227_5end | |||
|cluster_id=chr2:36776156..36776185,+ | |||
|description=CAGE_peak_3_at_CRIM1_5end | |||
|id=chr2:36776156..36776185,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.23e-13!246;CL:0002321!4.32e-13!248;CL:0000222!1.12e-12!119;CL:0000213!2.38e-11!57;CL:0000215!2.38e-11!57;CL:0000066!1.89e-10!254;CL:0000077!1.79e-09!19;CL:0000055!5.75e-09!180;CL:0000076!1.31e-07!62;CL:0000057!7.47e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000077;9.17e-12;19!CL:0002138;2.89e-08;6!CL:0000349;1.54e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,8.30e-12,19;CL:0000213,2.13e-11,58;CL:0000215,2.13e-11,58;CL:0000222,4.39e-11,121;CL:0005020,3.02e-08,6;CL:0002138,3.02e-08,6;CL:0005022,3.02e-08,6;CL:0000057,7.22e-08,76;CL:0000076,1.46e-07,63;CL:0000349,1.85e-07,19;CL:0002321,6.23e-07,250 | |||
|ontology_enrichment_development_v019=CL:0005022;2.89e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.78e-10!659;UBERON:0000467!1.14e-08!625;UBERON:0000480!1.70e-08!626;UBERON:0002049!4.27e-08!79;UBERON:0007798!4.27e-08!79;UBERON:0000490!1.68e-07!138;UBERON:0000483!3.82e-07!309;UBERON:0000119!5.72e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.09e-07;10!UBERON:0000158;3.09e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.57e-07,78;UBERON:0007798,2.57e-07,78;UBERON:0004923,3.00e-07,66 | |||
|phase1_expression=5.26867299884614,7.27941781229343,3.10099689011137,0,0,1.74467704820074,0,0,0.522371256399677,0,0,0.436882744260345,0,0.495065411840187,0.331397375727916,3.36162573225888,2.41077811209591,5.11217063271161,3.90346239032406,0,0,0.626909442956176,0.572471974262113,1.23186982565596,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0,0,0,1.29096936716765,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96373941714944,1.44575660953827,1.00267582127178,7.9665585428453,0,0.973269740605272,0.661743720148475,2.21729397462564,1.31752178539689,0.0654895377488563,0.364295288292542,0,0,0.174129737299267,0,0.238490624305342,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,3.35599548967925,7.97842321626196,1.67195973229448,4.39308490587859,4.26919515224052,4.01664735317604,0.402829317109147,0.760272105718513,5.6134273236079,0.735326160691737,5.67099363517232,2.67899184852239,0.22452937262617,0.788280363383256,0,0,0.732806975721629,0,0,0,5.96366342034382,3.67228483827281,0.926864265692532,1.14734648299525,1.06400514659507,1.68203280042692,1.06748995729705,2.71334303258876,0.933633106199299,0.269421344139376,0.490385709340376,0,0,0,0,0,0.448346041655403,0.23486899728753,0,0,0.204154171254893,0.491337269247072,0.413303124703062,1.18800285728205,4.20353779773547,0,0,0.673344455816265,0.125118519871964,0,0.438977620880838,7.66219489497549,1.50238058906597,2.83580457900053,1.07633781413317,4.27114777637135,3.81477422087211,1.20036438433761,0.309157587715317,1.03056216018252,2.41951913231067,8.27004027982204,0.584622030967192,0.504867548488229,2.57739716198438,0,1.77504796258307,1.0075209822764,2.7129694769678,0.773043412653187,2.45471508531751,0.286804595389004,0,0,0.116193942869518,0.310983165046111,0,0,0,9.64861407289328,1.38134921352481,2.3218396401599,2.88751792667834,0.236613600079688,0.168584690078102,0.482022059766964,0.882351781859152,0.435758888184812,1.18635309555548,0.539325232640658,0.98110732562673,0.38474715694639,0,0,0.4115740113314,0,0,0,1.18157981336281,0,2.58275720940538,2.23038153388083,1.75600456653801,0,0.904760751704678,1.29623823221941,0.325808305310325,0,4.3299402607582,1.85488647960123,0.821860859650752,4.90845922387651,6.01881166349594,10.2737242206683,0,0,0,0,0.148631162288728,0,1.6798212819886,0.708875486211932,1.52249488594842,0.871901815541886,0.766765358330422,1.47798971368783,0.088048434013226,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0.600686115687835,0,0,0,1.1734125731352,1.16344544182,0,0,3.45719551560332,2.08014873822732,0.257207374262142,1.41849132023278,0.266422179016099,5.29018576535146,0,4.93944202068461,0.325736184293735,3.55391948742546,1.58390374586686,3.31583314765545,0.871533458600294,3.499054691372,0,0,2.10833939483032,2.15662369942424,0,0,3.61953266668948,2.67119219315498,0.358121926479791,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,0,0.773288812777695,0.502548796003046,0,0,0,0,1.10422342547226,1.00034104211935,0,1.66376689224646,1.42743191037729,2.83864347061082,0.937131319941706,0,0,1.03473071292505,1.32845119707087,0.921845842708516,2.34585759063824,0,0,0,0,0,0.909382714338778,0,1.5119514666484,2.48107807818777,8.74733247741956,7.85848264412606,4.35673107469383,5.62877973973374,8.84696566289841,0,1.07946785661859,1.42049380250502,0.821271560138091,0,0.813472649219715,1.0877350463246,2.20557117333613,0.552485933615378,2.41110341145674,1.27463817604702,2.75361271414791,1.80479845162965,1.92538342761037,0,0,1.26661954671451,0,0,0.647747748306418,1.54227252690289,0.270946437543853,1.00337954770971,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,1.64007322849853,1.30151357865721,1.33953315142039,0.183138929636687,0.165018999841176,2.87132768998086,3.25030123018261,14.4615536859744,0.290012154876366,0.154048617114644,0.307007349452259,0.275673144969061,0.966782203814463,0.870100163485371,0.681813019328807,0.445160178233687,0.661139661443912,0.384380134730212,0.638063562472921,0.910420027699949,1.39453664789186,1.88887408098384,0,1.23213432070436,0,0,1.8532421910392,0.572499546967965,1.116475108079,0.949138274156178,1.90630193923825,0.511795582622668,0,0,0.78494864019923,3.05783177891635,2.19629623788844,2.00281083987667,0,0,0,0.48763373908959,2.19342140668156,1.05650146756755,0.409499734223957,2.96951407102797,0,0.551365343546124,4.64407282668854,0.876901770507525,0.578775534266688,0,0,0,0,1.00387946542836,3.63521451748548,0,0,2.11107635297664,1.31717957183961,0.379473173765715,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.659006605437454,0,0,0,2.06751060186264,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0.28853842595289,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0.121360521749513,0,0.852408440419239,4.53614521001611,4.45447021248958,3.07160702099232,0,0.281338832821026,1.78093928036649,0,0,2.19172787076177,0,0,0.715880777515084,0.123084805461069,8.08702927920699,0.539210106883961,0.537063524026827,0,0.394573622547734,0,2.22273980289274,0,0.556608588971108,0,0,0.0874599999961957,0.724999575434793,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0.219385397153973,1.52513848926586,0.975966209950223,0.384751292518985,1.02547850262301,0,1.52587995496613,0.869178975376065,4.14701507651495,4.76307485689684,4.26427820814908,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,1.79556088975062,0.848118428603645,0.865554558968364,0.995261931078505,0.0884575645033392,1.22206028986725,0.296521128680622,0.123563938946503,0.313265848516366,0.067401132980677,0.802577647298789,0.234264445725339,0,0,1.69946265673865,0,0,0,0.758238955541855,0.150323419414493,0.207376382794494,0,0.661983911750998,0.313932918407225,0,0.284609546029793,0.970722711091971,0.347119476670262,0.0979923974143777,1.04471047896483,0.17472666824203,2.0638323896594,0.870806981601766,1.31560770755134,1.14961639874493,0.193978032976839,0,0.451961481561065,1.23337732182076,0.19871461170299,0.569797163602908,0.195551382734803,0.400794101257669,0,1.79828648623917,0,0.114536596165916,0,0.14405479798815,0.745515213392595,0.707082103850386,1.76675467895698,1.46443984837266,1.4279750469085,0,0,0,0,0.859530882839914,0,0.837847203816763,0.687481272035051,0.717873024576814,0.399358000997982,0,0.223171457441873,0.0671834724867263,7.20599767084807,0,0.709048640765013,0.0824158583811665,0.539228350833479,0.78741985211799,0,0,0.136203406111576,0.160753148465019,0.275078873194468,0,0,0,0.182248669974074,0,0.315222829196793,0.209818352539992,0.316801009558219,0.35857467866569,0.383830394638891,0,0,0,1.08599920350743,3.45688596480507,1.63293680054705,0,0.082092520749339,2.3854323049959,0.453248366080503,0.146552233678082,0,0,0.52893040697076,0.513260513652988,0,1.06787412567695,0,0.828478110694391,0.992332043623902,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0.500763722825999,0.573409195690071,0.221858103073705,0.124192805882767,0,0.124980407962107,0,0.570930667089935,0.235265819698172,0,0.144921028610825,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0.686520205190771,0.453692771289717,0.15543720058278,0.295710299979268,0.796483835818512,0.449803112163605,0.155262956876259,0.829412415681711,1.59505028734797,5.21745061811734,0.300515217994437,5.71207818253193,0.406870733204662,0.181848659202559,0.429642228169954,0.464033759878494,5.57334244178062,2.80019435264208,0,1.6837474438296,0,0.192619830407303,4.28883182749851,1.30497145982606,3.85400073370863,0.926089897295336,3.67105056759701,2.50724377514082,4.01441881309264,2.63140859494449,3.53378291891762,3.47245268887647,1.35153952522458,2.56241518587947,1.0362910251936,1.82315973706429,0.138258436151731,0,0,0,1.31043939538565,2.21195617878347,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.247871528518004,0,1.27201740261367,0.0788617450012534,0,4.23211132428821,6.4311550244172,0.321146125482298,0,0.159633859057151,1.02558182120378,0.252071696221718,0,0.322951291263702,0,0,0.11796972334774,0.183428598521679,2.4260389891571,1.90691047733584,0,0.198916222116275,0.0752103283492573,1.81534561833168,0,0.785720083444267,3.11166643269184,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0.548257766857182,1.98484471355718,0,3.44958554626907,0,0,0,0,1.5966426629275,0,0.514464028312255,0.135939465953663,0.0657727735628491,3.66400906740301,0.556157009460346,0.156986185701028,0.628462359664008,0.560544326627578,0,3.45484145949794,0,0.428859265059938,0.316027223465453,0.581207126840626,0,0,0.207216164163037,0.85359238546975,0,0,0.473328002922261,0.426067023795788,1.69354820076372,0.4582137370881,0,0.955538938977433,0.447421727191169,0.196300467230486,0.243835849964539,0,0.205325613712494,0,0,0,0.198950775161368,0.356760272332706,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,5.26774055532232,0.187967835959707,0.257831551894309,0,0.178553938605658,0,0.401206833445841,0,0,0.143339583151451,1.41994405973866,0.0679914901909147,0.436350690340377,0,2.60396512716726,0.462175628631418,0.865253124247578,0.126166424835079,0.218531143927391,0.126698501011437,0,0,0.0918948995348449,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0.639701945702943,0.23806443146374,0,0.248298857183432,1.6819779387092,0.381882949668989,0.202117188958219,0,1.02669990325584,0,0.143444410785353,0,0.162806537221949,1.81436487992116,0,0.179650404213174,0,0,0,0,0.603821380773079,0 | |||
|short_description=p3@CRIM1 | |||
}} |
Latest revision as of 01:16, 17 September 2015
Short description: | p3@CRIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CRIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 115bp_to_BC026227_5end |
EntrezGene: | CRIM1 |
HGNC: | 2359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 8.30e-12 | 19 |
lining cell | 2.13e-11 | 58 |
barrier cell | 2.13e-11 | 58 |
mesodermal cell | 4.39e-11 | 121 |
lymphangioblast | 3.02e-08 | 6 |
endothelial cell of lymphatic vessel | 3.02e-08 | 6 |
vascular lymphangioblast | 3.02e-08 | 6 |
fibroblast | 7.22e-08 | 76 |
squamous epithelial cell | 1.46e-07 | 63 |
extraembryonic cell | 1.85e-07 | 19 |
embryonic cell | 6.23e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.57e-07 | 78 |
vascular system | 2.57e-07 | 78 |
organ component layer | 3.00e-07 | 66 |