FFCP PHASE1:Hg19::chr2:36777490..36777495,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51232 | |EntrezGene=51232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2359 | |HGNC=2359 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-278bp_to_AK026159_5end | |association_with_transcript=-278bp_to_AK026159_5end | ||
|cluster_id=chr2:36777490..36777495,+ | |||
|description=CAGE_peak_6_at_CRIM1_5end | |description=CAGE_peak_6_at_CRIM1_5end | ||
|id=chr2:36777490..36777495,+ | |id=chr2:36777490..36777495,+ | ||
|ontology_enrichment_celltype=CL:0000222!4.67e-10!119;CL:0000077!3.03e-08!19;CL:0000055!3.22e-07!180;CL:0000220!8.69e-07!246 | |ontology_enrichment_celltype=CL:0000222!4.67e-10!119;CL:0000077!3.03e-08!19;CL:0000055!3.22e-07!180;CL:0000220!8.69e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.42e-10;5!CL:0002541;2.18e-10;3!CL:0002620;1.45e-09;23!CL:0002138;3.51e-08;6!CL:0000349;2.28e-07;19!CL:0000134;5.13e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.08e-10,3;CL:0002537,3.11e-10,5;CL:0002620,1.54e-09,23;CL:0005020,3.82e-08,6;CL:0002138,3.82e-08,6;CL:0005022,3.82e-08,6;CL:0000349,3.55e-07,19;CL:0000057,9.63e-07,76 | |||
|ontology_enrichment_development_v019=CL:0005022;3.51e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.62e-10;5!DOID:450;1.62e-10;5!DOID:66;1.62e-10;5!DOID:423;1.62e-10;5!DOID:0080000;1.62e-10;5!DOID:11722;1.62e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.91e-10,5;DOID:450,1.91e-10,5;DOID:66,1.91e-10,5;DOID:423,1.91e-10,5;DOID:0080000,1.91e-10,5;DOID:11722,1.91e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.87e-07!365 | |ontology_enrichment_uberon=UBERON:0000475!3.87e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.55e-15;10!UBERON:0000158;5.55e-15;10!UBERON:0003124;2.18e-10;3!UBERON:0000920;2.18e-10;3!UBERON:0000305;1.51e-07;7!UBERON:0000478;2.28e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.37e-13,14;UBERON:0000158,2.37e-13,14;UBERON:0000920,3.08e-10,3;UBERON:0004871,1.22e-09,8;UBERON:0003124,1.18e-07,7;UBERON:0000305,2.61e-07,7;UBERON:0004923,2.85e-07,66;UBERON:0000478,3.33e-07,24;UBERON:0002097,4.72e-07,41 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.845726424575827,5.00366491765652,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.383587685530591,0.722878304769133,2.00535164254356,0.724232594804119,0,0,0.189069634328136,0.443458794925128,0.87834785693126,0.130979075497713,0.728590576585084,0,0,0,0,0,0.571994910780128,0,0,0,0.347140501607594,0,0.419499436209906,0.825354125820202,0.208994966536811,1.29208379584664,1.06729878806013,1.33888245105868,0.805658634218294,0,1.46437234528902,0,0.81014194788176,0.625098097988558,0,0.337834441449967,0,0,0,0,0,0.436094052142534,0.993943903390637,0.25326102332916,0,1.43418310374407,0,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.612975591598039,0.45071417671979,0.680593098960126,3.22901344239952,1.49490172172997,1.05965950579781,2.70081986475962,0.309157587715317,2.06112432036503,0.930584281657949,1.85653965465393,0.68205903612839,1.51460264546469,0.552299391853796,0,4.26011511019937,0.503760491138201,1.01736355386293,0.193260853163297,0.818238361772504,0,0,0,0,0.207322110030741,0,0,0,1.28648187638577,0,0.464367928031979,0,0.236613600079688,0.505754070234305,0.482022059766964,0.330881918197182,1.08939722046203,0,0.269662616320329,0.196221465125346,1.53898862778556,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.329250856225877,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.231860809950154,0.234817388471643,0.433099343283221,1.85194205030644,0.761016608938393,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.258543431515556,0,0,2.39344304926383,1.04007436911366,0.257207374262142,0,0,0.714889968290738,0,0.823240336780769,0,0.710783897485092,0,0,0,0.499864955910285,0,0,0,0.718874566474748,0,0,1.44781306667579,0.410952645100767,0.716243852959582,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.831883446123229,1.24900292158013,0.946214490203608,0.468565659970853,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.604780586659361,2.23297027036899,1.07423381301644,0.841980283299221,0.768834895534206,2.04682899626681,1.93024705372329,0,0,0.532685175939381,0.246381468041427,0.519254429183621,0.232420756919918,0.120859449591622,0.200506470303285,0,0.68888668898764,0.182091168006717,0.393373244878272,0.451199612907412,0.231046011313244,0,1.46139224653261,0.527758144464379,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0.447749509444357,0,0,0,0.984043937099117,0,0,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.290033387828457,0.170453254832202,0.0890320356467374,0.330569830721956,0,0,0.10115778085555,0,1.88887408098384,0,0,0.532306030317022,0.869932992075073,0.74129687641568,0.715624433709956,0.372158369359667,0.632758849437452,0.953150969619124,0,0.42793898803392,0,0,0.899362287916574,0.274537029736055,0.471249609382746,0,1.58510321173008,0.421258456238981,0,0.731140468893853,1.05650146756755,0.9554993798559,0.707027159768564,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0.286822704408103,0.982490410131212,0.35667105148125,0,0.633322905892992,1.31717957183961,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,1.19372242368845,0.593929361665277,6.14321404198464,0,0.140669416410513,0.222617410045812,0,0,0.597743964753209,0,0,0.102268682502155,0,3.11039587661807,0,0,0,2.86065876347107,0,2.22273980289274,0,0.371072392647405,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0.0769502585037971,0.797594390929008,0,0.359030577639089,0.217294743844016,2.23300811812344,1.28236630762607,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,0.979396848954886,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0,0,0,0.661983911750998,0,0,0,0.554698692052555,0.173559738335131,0.0979923974143777,0,0,0.687944129886466,0,0.219267951258557,0,1.84279131327997,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0.799238438328521,0,0.114536596165916,0,0.288109595976299,0.124252535565433,0,0,0.418411385249333,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,1.11585728720936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| ||
|short_description=p6@CRIM1 | |short_description=p6@CRIM1 | ||
}} | }} |
Latest revision as of 01:22, 17 September 2015
Short description: | p6@CRIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CRIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -278bp_to_AK026159_5end |
EntrezGene: | CRIM1 |
HGNC: | 2359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.08e-10 | 3 |
amnion mesenchymal stem cell | 3.11e-10 | 5 |
skin fibroblast | 1.54e-09 | 23 |
lymphangioblast | 3.82e-08 | 6 |
endothelial cell of lymphatic vessel | 3.82e-08 | 6 |
vascular lymphangioblast | 3.82e-08 | 6 |
extraembryonic cell | 3.55e-07 | 19 |
fibroblast | 9.63e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.37e-13 | 14 |
membranous layer | 2.37e-13 | 14 |
egg chorion | 3.08e-10 | 3 |
somatic layer of lateral plate mesoderm | 1.22e-09 | 8 |
chorion | 1.18e-07 | 7 |
amnion | 2.61e-07 | 7 |
organ component layer | 2.85e-07 | 66 |
extraembryonic structure | 3.33e-07 | 24 |
skin of body | 4.72e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.91e-10 | 5 |
myotonic disease | 1.91e-10 | 5 |
muscle tissue disease | 1.91e-10 | 5 |
myopathy | 1.91e-10 | 5 |
muscular disease | 1.91e-10 | 5 |
myotonic dystrophy | 1.91e-10 | 5 |