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FFCP PHASE1:Hg19::chr10:129785574..129785580,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=5791
|EntrezGene=5791
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=9669
|HGNC=9669
|TSSclassifier=strong
|UniProt=B4DRZ3
|UniProt=B4DRZ3
|association_with_transcript=0bp_to_ENST00000430713_5end
|association_with_transcript=0bp_to_ENST00000430713_5end
|cluster_id=chr10:129785574..129785580,+
|coexpression_cluster_id=C140
|description=CAGE_peak_14_at_PTPRE_5end
|description=CAGE_peak_14_at_PTPRE_5end
|id=chr10:129785574..129785580,+
|id=chr10:129785574..129785580,+
|ontology_enrichment_celltype=CL:0002139!3.49e-70!24;CL:0000115!5.40e-59!35;CL:0000071!6.39e-53!18;CL:0002546!6.39e-53!18;CL:0002078!2.75e-45!44;CL:0000213!3.75e-33!57;CL:0000215!3.75e-33!57;CL:1000413!4.06e-27!9;CL:0002543!1.09e-18!6;CL:0005020!1.43e-18!6;CL:0002138!1.43e-18!6;CL:0005022!1.43e-18!6;CL:0002544!2.52e-18!6;CL:0000222!5.52e-12!119;CL:0000076!8.04e-12!62;CL:0002144!2.54e-10!3;CL:0002618!5.41e-10!3;CL:0002545!1.93e-07!2
|ontology_enrichment_celltype=CL:0002139!3.49e-70!24;CL:0000115!5.40e-59!35;CL:0000071!6.39e-53!18;CL:0002546!6.39e-53!18;CL:0002078!2.75e-45!44;CL:0000213!3.75e-33!57;CL:0000215!3.75e-33!57;CL:1000413!4.06e-27!9;CL:0002543!1.09e-18!6;CL:0005020!1.43e-18!6;CL:0002138!1.43e-18!6;CL:0005022!1.43e-18!6;CL:0002544!2.52e-18!6;CL:0000222!5.52e-12!119;CL:0000076!8.04e-12!62;CL:0002144!2.54e-10!3;CL:0002618!5.41e-10!3;CL:0002545!1.93e-07!2
|ontology_enrichment_celltype_v019=CL:0002139;1.00e-121;24!CL:0000115;8.66e-94;36!CL:0000071;3.02e-88;18!CL:0002078;1.08e-56;45!CL:1000413;9.12e-45;9!CL:0000213;8.35e-40;58!CL:0000215;8.35e-40;58!CL:0002138;1.92e-34;6!CL:0002543;2.21e-34;6!CL:0002544;2.71e-22;6!CL:0002545;1.52e-17;2!CL:0000076;3.86e-16;63!CL:0002144;1.91e-12;3!CL:0002618;9.17e-12;3!CL:0002188;1.48e-07;5
|ontology_enrichment_celltype_v019_2=CL:0002139,7.00e-122,24;CL:0000115,1.97e-108,36;CL:0000071,2.05e-88,18;CL:0002546,2.05e-88,18;CL:0002078,3.98e-86,45;CL:0000213,4.08e-66,58;CL:0000215,4.08e-66,58;CL:1000413,8.86e-45,9;CL:0002543,1.51e-34,6;CL:0005020,1.99e-34,6;CL:0002138,1.99e-34,6;CL:0005022,1.99e-34,6;CL:0000222,5.56e-30,121;CL:0000076,1.34e-23,63;CL:0002544,2.57e-22,6;CL:0002545,9.58e-18,2;CL:0002321,1.41e-12,250;CL:0000066,1.64e-12,253;CL:0002144,1.92e-12,3;CL:0002618,6.96e-12,3;CL:0002188,1.61e-07,5
|ontology_enrichment_development_v019=CL:0002546;3.02e-88;18!CL:0005022;1.92e-34;6!CL:0000222;3.25e-11;121
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:6193;7.82e-10;1
|ontology_enrichment_disease_v019_2=DOID:6193,1.25e-09,1
|ontology_enrichment_uberon=UBERON:0001986!6.39e-53!18;UBERON:0004638!6.39e-53!18;UBERON:0004852!6.39e-53!18;UBERON:0000487!2.39e-42!22;UBERON:0006914!1.22e-36!25;UBERON:0000055!4.59e-28!69;UBERON:0003915!4.06e-27!9;UBERON:0004700!4.06e-27!9;UBERON:0001917!4.06e-27!9;UBERON:0002049!1.67e-23!79;UBERON:0007798!1.67e-23!79;UBERON:0004872!6.18e-21!84;UBERON:0001009!1.93e-19!113;UBERON:0001981!2.33e-19!60;UBERON:0007500!2.33e-19!60;UBERON:0004537!2.33e-19!60;UBERON:0006965!2.33e-19!60;UBERON:0004535!9.69e-19!110;UBERON:0001638!4.40e-16!9;UBERON:0003920!4.40e-16!9;UBERON:0004582!4.40e-16!9;UBERON:0003914!4.04e-14!118;UBERON:0001473!1.00e-13!8;UBERON:0004536!1.00e-13!8;UBERON:0006558!1.00e-13!8;UBERON:0004111!5.80e-12!241;UBERON:0000477!6.20e-12!286;UBERON:0002465!8.12e-11!10;UBERON:0000025!1.79e-10!194;UBERON:0001915!2.54e-10!3;UBERON:0001982!2.54e-10!3;UBERON:0005800!1.93e-07!2;UBERON:0001515!1.93e-07!2;UBERON:0003081!2.67e-07!216;UBERON:0002133!5.40e-07!2
|ontology_enrichment_uberon_v019=UBERON:0004638;3.02e-88;18!UBERON:0001986;3.02e-88;18!UBERON:0004852;3.02e-88;18!UBERON:0000487;8.44e-72;22!UBERON:0006914;6.47e-63;25!UBERON:0003915;9.12e-45;9!UBERON:0004700;9.12e-45;9!UBERON:0001917;9.12e-45;9!UBERON:0000490;3.56e-42;33!UBERON:0000055;3.17e-26;65!UBERON:0001473;7.78e-26;8!UBERON:0004536;7.78e-26;8!UBERON:0006558;7.78e-26;8!UBERON:0001638;6.37e-23;9!UBERON:0003920;6.37e-23;9!UBERON:0004582;6.37e-23;9!UBERON:0002465;1.16e-20;10!UBERON:0007500;1.77e-19;56!UBERON:0001981;1.77e-19;56!UBERON:0004537;1.77e-19;56!UBERON:0002049;3.33e-18;75!UBERON:0007798;3.33e-18;75!UBERON:0005800;1.52e-17;2!UBERON:0001515;1.52e-17;2!UBERON:0003914;6.00e-13;74!UBERON:0010523;1.91e-12;3!UBERON:0001915;1.91e-12;3!UBERON:0001982;1.91e-12;3!UBERON:0001009;3.24e-12;112!UBERON:0000025;7.46e-11;93!UBERON:0004535;7.92e-11;109!UBERON:0002134;1.91e-09;1!UBERON:0005208;1.91e-09;1!UBERON:0004145;1.91e-09;1!UBERON:0005946;1.91e-09;1!UBERON:0005965;1.91e-09;1!UBERON:0002078;1.91e-09;1!UBERON:0001637;2.42e-09;42!UBERON:0003509;2.42e-09;42!UBERON:0004572;2.42e-09;42!UBERON:0004111;1.15e-08;130!UBERON:0002405;1.45e-07;27!UBERON:0002066;2.09e-07;5
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|short_description=p14@PTPRE
|short_description=p14@PTPRE
}}
}}

Latest revision as of 01:42, 17 September 2015

Short description:p14@PTPRE
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_14_at_PTPRE_5end
Coexpression cluster:C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen
Association with transcript: 0bp_to_ENST00000430713_5end
EntrezGene:PTPRE
HGNC: 9669
UniProt: B4DRZ3
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data