FFCP PHASE1:Hg19::chr10:129785574..129785580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9669 | |HGNC=9669 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=B4DRZ3 | |UniProt=B4DRZ3 | ||
|association_with_transcript=0bp_to_ENST00000430713_5end | |association_with_transcript=0bp_to_ENST00000430713_5end | ||
|cluster_id=chr10:129785574..129785580,+ | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_14_at_PTPRE_5end | |description=CAGE_peak_14_at_PTPRE_5end |
Latest revision as of 01:42, 17 September 2015
Short description: | p14@PTPRE |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PTPRE_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000430713_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | B4DRZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p14@PTPRE |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.00e-122 | 24 |
endothelial cell | 1.97e-108 | 36 |
blood vessel endothelial cell | 2.05e-88 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.05e-88 | 18 |
meso-epithelial cell | 3.98e-86 | 45 |
lining cell | 4.08e-66 | 58 |
barrier cell | 4.08e-66 | 58 |
endothelial cell of artery | 8.86e-45 | 9 |
vein endothelial cell | 1.51e-34 | 6 |
lymphangioblast | 1.99e-34 | 6 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.05e-88 | 18 |
endothelium | 2.05e-88 | 18 |
cardiovascular system endothelium | 2.05e-88 | 18 |
simple squamous epithelium | 6.16e-72 | 22 |
squamous epithelium | 4.91e-63 | 25 |
vessel | 1.10e-50 | 68 |
endothelial tube | 8.86e-45 | 9 |
arterial system endothelium | 8.86e-45 | 9 |
endothelium of artery | 8.86e-45 | 9 |
vasculature | 8.96e-44 | 78 |
Showing 1 to 10 of 44 entries