FFCP PHASE1:Hg19::chr4:185772225..185772233,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100500818 | |EntrezGene=100500818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=38954 | |HGNC=38954 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_NR_037510_5end | |association_with_transcript=30bp_to_NR_037510_5end | ||
|cluster_id=chr4:185772225..185772233,- | |||
|description=CAGE_peak_6_at_MIR3945_5end | |description=CAGE_peak_6_at_MIR3945_5end | ||
|id=chr4:185772225..185772233,- | |id=chr4:185772225..185772233,- | ||
|ontology_enrichment_celltype=CL:0002057!1.64e-42!42;CL:0000860!2.16e-39!45;CL:0000766!1.54e-26!76;CL:0002194!2.00e-26!63;CL:0000576!2.00e-26!63;CL:0000040!2.00e-26!63;CL:0000559!2.00e-26!63;CL:0002009!1.70e-25!65;CL:0000839!2.13e-23!70;CL:0000557!5.16e-23!71;CL:0002393!3.81e-21!9;CL:0002397!3.81e-21!9;CL:0002087!1.73e-20!119;CL:0000738!3.35e-20!140;CL:0000763!1.97e-18!112;CL:0000049!1.97e-18!112;CL:0000037!6.52e-17!172;CL:0000566!6.52e-17!172;CL:0002031!5.57e-16!124;CL:0000988!1.13e-15!182;CL:0002032!6.75e-15!165;CL:0000837!6.75e-15!165;CL:0000134!7.09e-09!358;CL:0002320!1.40e-08!365;CL:0000219!2.68e-08!390;CL:0000842!9.19e-08!3 | |ontology_enrichment_celltype=CL:0002057!1.64e-42!42;CL:0000860!2.16e-39!45;CL:0000766!1.54e-26!76;CL:0002194!2.00e-26!63;CL:0000576!2.00e-26!63;CL:0000040!2.00e-26!63;CL:0000559!2.00e-26!63;CL:0002009!1.70e-25!65;CL:0000839!2.13e-23!70;CL:0000557!5.16e-23!71;CL:0002393!3.81e-21!9;CL:0002397!3.81e-21!9;CL:0002087!1.73e-20!119;CL:0000738!3.35e-20!140;CL:0000763!1.97e-18!112;CL:0000049!1.97e-18!112;CL:0000037!6.52e-17!172;CL:0000566!6.52e-17!172;CL:0002031!5.57e-16!124;CL:0000988!1.13e-15!182;CL:0002032!6.75e-15!165;CL:0000837!6.75e-15!165;CL:0000134!7.09e-09!358;CL:0002320!1.40e-08!365;CL:0000219!2.68e-08!390;CL:0000842!9.19e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-19;33!CL:0002057;2.30e-19;33!CL:0000576;2.02e-15;48!CL:0002393;2.11e-14;6!CL:0002397;2.11e-14;6!CL:0000473;7.32e-13;39!CL:0000234;7.32e-13;39!CL:0000766;1.90e-11;69!CL:0000767;4.84e-08;3!CL:0000763;4.71e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.69e-30,42;CL:0002057,8.69e-30,42;CL:0000473,4.82e-26,48;CL:0000234,4.82e-26,48;CL:0000766,1.31e-21,72;CL:0002194,8.56e-21,59;CL:0000576,8.56e-21,59;CL:0000040,8.56e-21,59;CL:0000559,8.56e-21,59;CL:0002009,4.08e-20,61;CL:0000839,1.35e-18,66;CL:0000557,2.56e-18,67;CL:0000763,2.35e-14,108;CL:0000049,2.35e-14,108;CL:0000738,2.48e-11,136;CL:0002087,1.34e-10,115;CL:0002031,3.81e-10,120;CL:0002393,6.48e-10,9;CL:0002397,6.48e-10,9;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,4.31e-09,168;CL:0000988,1.32e-08,177;CL:0000767,4.84e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.05e-24;42!UBERON:0010115;6.31e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.54e-20!80;UBERON:0002390!1.86e-18!102;UBERON:0003061!1.86e-18!102;UBERON:0001474!2.60e-18!86;UBERON:0002193!2.07e-16!112;UBERON:0004765!5.37e-15!101;UBERON:0001434!5.37e-15!101;UBERON:0002405!1.11e-12!115;UBERON:0003081!4.37e-09!216;UBERON:0002384!3.54e-08!375;UBERON:0002204!1.71e-07!167;UBERON:0002363!6.43e-07!1;UBERON:0007647!6.43e-07!1;UBERON:0010115!6.43e-07!1 | |ontology_enrichment_uberon=UBERON:0002371!5.54e-20!80;UBERON:0002390!1.86e-18!102;UBERON:0003061!1.86e-18!102;UBERON:0001474!2.60e-18!86;UBERON:0002193!2.07e-16!112;UBERON:0004765!5.37e-15!101;UBERON:0001434!5.37e-15!101;UBERON:0002405!1.11e-12!115;UBERON:0003081!4.37e-09!216;UBERON:0002384!3.54e-08!375;UBERON:0002204!1.71e-07!167;UBERON:0002363!6.43e-07!1;UBERON:0007647!6.43e-07!1;UBERON:0010115!6.43e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;6.31e-21;1!UBERON:0002360;3.70e-11;2!UBERON:0000094;3.70e-11;2!UBERON:0010743;3.70e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,7.72e-21,1;UBERON:0007645,7.72e-21,1;UBERON:0007647,7.72e-21,1;UBERON:0010115,7.72e-21,1;UBERON:0002371,3.81e-16,76;UBERON:0001474,5.89e-15,82;UBERON:0004765,1.30e-13,90;UBERON:0002405,3.62e-13,93;UBERON:0002390,1.74e-12,98;UBERON:0003061,1.74e-12,98;UBERON:0001434,3.13e-12,100;UBERON:0002193,2.63e-11,108;UBERON:0002360,4.09e-11,2;UBERON:0000094,4.09e-11,2;UBERON:0010743,4.09e-11,2;UBERON:0002204,3.53e-07,167 | |||
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|short_description=p6@MIR3945 | |short_description=p6@MIR3945 | ||
}} | }} |
Latest revision as of 02:20, 17 September 2015
Short description: | p6@MIR3945 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MIR3945_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_NR_037510_5end |
EntrezGene: | MIR3945 |
HGNC: | 38954 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.69e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.69e-30 | 42 |
defensive cell | 4.82e-26 | 48 |
phagocyte | 4.82e-26 | 48 |
myeloid leukocyte | 1.31e-21 | 72 |
monopoietic cell | 8.56e-21 | 59 |
monocyte | 8.56e-21 | 59 |
monoblast | 8.56e-21 | 59 |
promonocyte | 8.56e-21 | 59 |
macrophage dendritic cell progenitor | 4.08e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.35e-18 | 66 |
granulocyte monocyte progenitor cell | 2.56e-18 | 67 |
myeloid cell | 2.35e-14 | 108 |
common myeloid progenitor | 2.35e-14 | 108 |
leukocyte | 2.48e-11 | 136 |
nongranular leukocyte | 1.34e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.81e-10 | 120 |
intermediate monocyte | 6.48e-10 | 9 |
CD14-positive, CD16-positive monocyte | 6.48e-10 | 9 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
hematopoietic stem cell | 4.31e-09 | 168 |
hematopoietic cell | 1.32e-08 | 177 |
basophil | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dura mater | 7.72e-21 | 1 |
future meninx | 7.72e-21 | 1 |
ectomeninx | 7.72e-21 | 1 |
future dura mater | 7.72e-21 | 1 |
bone marrow | 3.81e-16 | 76 |
bone element | 5.89e-15 | 82 |
skeletal element | 1.30e-13 | 90 |
immune system | 3.62e-13 | 93 |
hematopoietic system | 1.74e-12 | 98 |
blood island | 1.74e-12 | 98 |
skeletal system | 3.13e-12 | 100 |
hemolymphoid system | 2.63e-11 | 108 |
meninx | 4.09e-11 | 2 |
membrane organ | 4.09e-11 | 2 |
meningeal cluster | 4.09e-11 | 2 |
musculoskeletal system | 3.53e-07 | 167 |