FFCP PHASE1:Hg19::chr20:54967243..54967278,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:54967243..54967278,- to FFCP PHASE1:Hg19::chr20:54967243..54967278,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6790 | |EntrezGene=6790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11393 | |HGNC=11393 | ||
|TSSclassifier=strong | |||
|UniProt=O14965,A3KFJ0,Q5QPD4,A3KFJ2,Q5QPD1 | |UniProt=O14965,A3KFJ0,Q5QPD4,A3KFJ2,Q5QPD1 | ||
|association_with_transcript=0bp_to_ENST00000347343,ENST00000371356,ENST00000395907,ENST00000395911,ENST00000441357,ENST00000451915,ENST00000456249_5end | |||
|cluster_id=chr20:54967243..54967278,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_AURKA_5end | |||
|id=chr20:54967243..54967278,- | |||
|ontology_enrichment_celltype=CL:0000548!9.07e-27!679;CL:0000004!9.07e-27!679;CL:0000255!9.07e-27!679;CL:0000012!4.04e-26!682;CL:0000066!2.79e-22!254;CL:0000003!6.11e-15!722;CL:0000063!1.42e-12!578;CL:0002321!4.59e-11!248;CL:0000220!1.31e-10!246;CL:0000055!3.70e-10!180;CL:0000144!1.74e-09!625;CL:0000076!7.78e-08!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.20e-23,253;CL:0002321,5.01e-11,250;CL:0000076,1.72e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.87e-52!235;DOID:14566!4.25e-51!239;DOID:0050687!2.26e-29!143;DOID:305!4.57e-25!106;DOID:0050686!1.45e-22!137;DOID:2531!1.11e-14!51;DOID:0060083!1.11e-14!51;DOID:1240!7.34e-12!39;DOID:7!8.05e-10!39;DOID:8692!1.04e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.25e-09;39!DOID:2531;2.14e-09;51!DOID:0060083;2.14e-09;51!DOID:8692;1.39e-08;31!DOID:7;3.58e-08;39!DOID:305;5.15e-08;106!DOID:0050687;3.58e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.38e-52,235;DOID:14566,3.19e-51,239;DOID:0050687,1.92e-29,143;DOID:305,3.99e-25,106;DOID:0050686,1.28e-22,137;DOID:2531,1.03e-14,51;DOID:0060083,1.03e-14,51;DOID:1240,6.91e-12,39;DOID:7,7.67e-10,39;DOID:8692,9.94e-09,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@AURKA | |||
}} | }} |
Latest revision as of 03:01, 17 September 2015
Short description: | p1@AURKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AURKA_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000347343, ENST00000371356, ENST00000395907, ENST00000395911, ENST00000441357, ENST00000451915, ENST00000456249_5end |
EntrezGene: | AURKA |
HGNC: | 11393 |
UniProt: | O14965A3KFJ0Q5QPD4A3KFJ2Q5QPD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.20e-23 | 253 |
embryonic cell | 5.01e-11 | 250 |
squamous epithelial cell | 1.72e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.38e-52 | 235 |
disease of cellular proliferation | 3.19e-51 | 239 |
cell type cancer | 1.92e-29 | 143 |
carcinoma | 3.99e-25 | 106 |
organ system cancer | 1.28e-22 | 137 |
hematologic cancer | 1.03e-14 | 51 |
immune system cancer | 1.03e-14 | 51 |
leukemia | 6.91e-12 | 39 |
disease of anatomical entity | 7.67e-10 | 39 |
myeloid leukemia | 9.94e-09 | 31 |